RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 GNB4Q9HAV0 340 aa13.59□□□□□ -0.23
ATG3-205ENST00000488910 SOX15O60248 233 aa13.58□□□□□ -0.24
ATG3-205ENST00000488910 CNIH1O95406 144 aa13.58□□□□□ -0.24
ATG3-205ENST00000488910 OR8U8P0C7N1 319 aa13.58□□□□□ -0.24
ATG3-205ENST00000488910 NFYAP23511 347 aaPredicted RBP13.58□□□□□ -0.24
ATG3-205ENST00000488910 ZNF616Q08AN1 781 aa13.58□□□□□ -0.24
ATG3-205ENST00000488910 LFNGQ8NES3 379 aa13.58□□□□□ -0.24
ATG3-205ENST00000488910 ARPC1AQ92747 370 aa13.58□□□□□ -0.24
ATG3-205ENST00000488910 TMEM68Q96MH6 324 aa13.58□□□□□ -0.24
ATG3-205ENST00000488910 FAM103A1Q9BTL3 118 aaKnown RBP13.58□□□□□ -0.24
ATG3-205ENST00000488910 TPSG1Q9NRR2 321 aa13.58□□□□□ -0.24
ATG3-205ENST00000488910 TRIM64CA6NLI5 447 aa13.57□□□□□ -0.24
ATG3-205ENST00000488910 SRRM4A7MD48 611 aaKnown RBP13.57□□□□□ -0.24
ATG3-205ENST00000488910 RPS19P39019 145 aaKnown RBP13.57□□□□□ -0.24
ATG3-205ENST00000488910 C9orf66Q5T8R8 295 aa13.57□□□□□ -0.24
ATG3-205ENST00000488910 HOGA1Q86XE5 327 aa13.57□□□□□ -0.24
ATG3-205ENST00000488910 TEX45Q8NA69 505 aa13.57□□□□□ -0.24
ATG3-205ENST00000488910 BEST4Q8NFU0 473 aa13.57□□□□□ -0.24
ATG3-205ENST00000488910 OSR1Q8TAX0 266 aaPredicted RBP13.57□□□□□ -0.24
ATG3-205ENST00000488910 S100A16Q96FQ6 103 aaKnown RBP13.57□□□□□ -0.24
ATG3-205ENST00000488910 SLA2Q9H6Q3 261 aa13.57□□□□□ -0.24
ATG3-205ENST00000488910 AUNIPQ9H7T9 357 aa13.57□□□□□ -0.24
ATG3-205ENST00000488910 PRELID3BQ9Y3B1 194 aa13.57□□□□□ -0.24
ATG3-205ENST00000488910 LINC00473A8K010 186 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 J3QRK9 145 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 K7EIL1 84 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 ARPC1BO15143 372 aaKnown RBP13.56□□□□□ -0.24
ATG3-205ENST00000488910 XRCC3O43542 346 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 TUSC2O75896 110 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 CBX5P45973 191 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 ARPC4P59998 168 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 UBE2KP61086 200 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 GNB1P62873 340 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 VMA21Q3ZAQ7 101 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 GRPEL2Q8TAA5 225 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 OR5B12Q96R08 314 aa13.56□□□□□ -0.24
ATG3-205ENST00000488910 RBMX2Q9Y388 322 aaKnown RBP13.56□□□□□ -0.24
ATG3-205ENST00000488910 WI2-2373I1.2A0A1W2PRP0 233 aa13.55□□□□□ -0.24
ATG3-205ENST00000488910 H3BUA1 57 aa13.55□□□□□ -0.24
ATG3-205ENST00000488910 RAMP3O60896 148 aa13.55□□□□□ -0.24
ATG3-205ENST00000488910 CRYZL1O95825 349 aa13.55□□□□□ -0.24
ATG3-205ENST00000488910 TGFBR1P36897 503 aa13.55□□□□□ -0.24
ATG3-205ENST00000488910 LSM3P62310 102 aaKnown RBP13.55□□□□□ -0.24
ATG3-205ENST00000488910 DGCR2P98153 550 aa13.55□□□□□ -0.24
ATG3-205ENST00000488910 PJVKQ0ZLH3 352 aa13.55□□□□□ -0.24
ATG3-205ENST00000488910 HSD17B10Q99714 261 aaKnown RBP13.55□□□□□ -0.24
ATG3-205ENST00000488910 IGKV1D-13A0A0B4J2D9 117 aa13.54□□□□□ -0.24
ATG3-205ENST00000488910 SEC14L6B5MCN3 397 aa13.54□□□□□ -0.24
ATG3-205ENST00000488910 IGLV2-14P01704 120 aa13.54□□□□□ -0.24
ATG3-205ENST00000488910 LGALS1P09382 135 aaKnown RBP13.54□□□□□ -0.24
ATG3-205ENST00000488910 IGKV1-13P0DP09 117 aa13.54□□□□□ -0.24
ATG3-205ENST00000488910 SSBP2P81877 361 aaPredicted RBP13.54□□□□□ -0.24
ATG3-205ENST00000488910 UBE2NLQ5JXB2 153 aa13.54□□□□□ -0.24
ATG3-205ENST00000488910 OVCH2Q7RTZ1 564 aa13.54□□□□□ -0.24
ATG3-205ENST00000488910 GVQW1Q8N7I0 195 aa13.54□□□□□ -0.24
ATG3-205ENST00000488910 CASTOR1Q8WTX7 329 aa13.54□□□□□ -0.24
ATG3-205ENST00000488910 KCTD12Q96CX2 325 aaKnown RBP13.54□□□□□ -0.24
ATG3-205ENST00000488910 RHOVQ96L33 236 aa13.54□□□□□ -0.24
ATG3-205ENST00000488910 MRPS7Q9Y2R9 242 aaKnown RBP13.54□□□□□ -0.24
ATG3-205ENST00000488910 LINC01619G3V211 115 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 FCGR3BO75015 233 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 BRI3O95415 125 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 FCGR2CP31995 323 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 INSL3P51460 131 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 TPPP2P59282 170 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 DCTN2Q13561 401 aaKnown RBP13.53□□□□□ -0.24
ATG3-205ENST00000488910 MSMO1Q15800 293 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 PRSS8Q16651 343 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 DEFB121Q5J5C9 76 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 ASPHD1Q5U4P2 390 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 ZNF66Q6ZN08 573 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 KCTD9Q7L273 389 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 POC5Q8NA72 575 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 OR5T1Q8NG75 326 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 SLC25A46Q96AG3 418 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 MS4A10Q96PG2 267 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 DCUN1D5Q9BTE7 237 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 SCOCQ9UIL1 159 aa13.53□□□□□ -0.24
ATG3-205ENST00000488910 A0A0G2JLM5 398 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 CREBL2O60519 120 aaPredicted RBP13.52□□□□□ -0.25
ATG3-205ENST00000488910 TRGV3P03979 118 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 HSPB1P04792 205 aaKnown RBP13.52□□□□□ -0.25
ATG3-205ENST00000488910 AADACP22760 399 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 EIF4EBP1Q13541 118 aaPredicted RBP13.52□□□□□ -0.25
ATG3-205ENST00000488910 MRGPRG-AS1Q2M3A8 158 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 SAMD12Q8N8I0 201 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 ZBTB34Q8NCN2 500 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 OR5AP2Q8NGF4 316 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 DCUN1D4Q92564 292 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 FUNDC2Q9BWH2 189 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 ALX4Q9H161 411 aaPredicted RBP13.52□□□□□ -0.25
ATG3-205ENST00000488910 ZNF355PQ9NSJ1 428 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 TNCP24821 2201 aa13.52□□□□□ -0.25
ATG3-205ENST00000488910 MSGN1A6NI15 193 aa13.51□□□□□ -0.25
ATG3-205ENST00000488910 OVOL1O14753 267 aa13.51□□□□□ -0.25
ATG3-205ENST00000488910 RPL30P62888 115 aaKnown RBP13.51□□□□□ -0.25
ATG3-205ENST00000488910 CDK10Q15131 360 aa13.51□□□□□ -0.25
ATG3-205ENST00000488910 TMEM69Q5SWH9 247 aa13.51□□□□□ -0.25
ATG3-205ENST00000488910 MFSD4AQ8N468 514 aa13.51□□□□□ -0.25
ATG3-205ENST00000488910 OR13F1Q8NGS4 319 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms