RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 OR2W1Q9Y3N9 320 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 LINC00473A8K010 186 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 SHOXO15266 292 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 CRYZL1O95825 349 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 CTXN2P0C2S0 81 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 OR8U8P0C7N1 319 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 RRASP10301 218 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 LGALS7P47929 136 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 LSM3P62310 102 aaKnown RBP13.77□□□□□ -0.21
ITGB1-215ENST00000488494 PJVKQ0ZLH3 352 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 TMEM177Q53S58 311 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 CNIH2Q6PI25 160 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 OR1N2Q8NGR9 330 aa13.77□□□□□ -0.21
ITGB1-215ENST00000488494 A0A0A6YYH2 397 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 IGKV1D-13A0A0B4J2D9 117 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 A6NJ64 397 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 SEC14L6B5MCN3 397 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 CNIH1O95406 144 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 CRYGBP07316 175 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 LGALS1P09382 135 aaKnown RBP13.76□□□□□ -0.21
ITGB1-215ENST00000488494 IGKV1-13P0DP09 117 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 TPPP2P59282 170 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 ARPC4P59998 168 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 AKIRIN2Q53H80 203 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 KCTD9Q7L273 389 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 MS4A10Q96PG2 267 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 SPATA2Q9UM82 520 aa13.76□□□□□ -0.21
ITGB1-215ENST00000488494 SRRM4A7MD48 611 aaKnown RBP13.75□□□□□ -0.21
ITGB1-215ENST00000488494 HLA-DQB1P01920 261 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 DGCR2P98153 550 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 VMA21Q3ZAQ7 101 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 OR2B11Q5JQS5 317 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 C9orf66Q5T8R8 295 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 GVQW1Q8N7I0 195 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 BEST4Q8NFU0 473 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 AUNIPQ9H7T9 357 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 DIABLOQ9NR28 239 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 RBMX2Q9Y388 322 aaKnown RBP13.75□□□□□ -0.21
ITGB1-215ENST00000488494 COL7A1Q02388 2944 aa13.75□□□□□ -0.21
ITGB1-215ENST00000488494 FCGR3BO75015 233 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 TMEM127O75204 238 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 TUSC2O75896 110 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 IGLV2-14P01704 120 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 IGHV3-11P01762 117 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 FCER2P06734 321 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 PTHLHP12272 177 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 CD40LGP29965 261 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 RPS19P39019 145 aaKnown RBP13.74□□□□□ -0.21
ITGB1-215ENST00000488494 UBE2KP61086 200 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 IDO2Q6ZQW0 420 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 CROCCP3Q8IVE0 287 aa13.74□□□□□ -0.21
ITGB1-215ENST00000488494 TRGV3P03979 118 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 SLURP1P55000 103 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 MRGPRG-AS1Q2M3A8 158 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 DEFB121Q5J5C9 76 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 UBE2NLQ5JXB2 153 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 OVCH2Q7RTZ1 564 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 HOGA1Q86XE5 327 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 POC5Q8NA72 575 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 OSR1Q8TAX0 266 aaPredicted RBP13.73□□□□□ -0.21
ITGB1-215ENST00000488494 SLA2Q9H6Q3 261 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 ZNF355PQ9NSJ1 428 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 ZMAT5Q9UDW3 170 aaKnown RBP13.73□□□□□ -0.21
ITGB1-215ENST00000488494 MRPS7Q9Y2R9 242 aaKnown RBP13.73□□□□□ -0.21
ITGB1-215ENST00000488494 PRELID3BQ9Y3B1 194 aa13.73□□□□□ -0.21
ITGB1-215ENST00000488494 IGHV4OR15-8A0A075B7B6 117 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 A0A087WW49 117 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 MEIS3P1A6NDR6 274 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 LINC01619G3V211 115 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 SLC22A5O76082 557 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 SAA1P0DJI8 122 aaPredicted RBP13.72□□□□□ -0.21
ITGB1-215ENST00000488494 RPL30P62888 115 aaKnown RBP13.72□□□□□ -0.21
ITGB1-215ENST00000488494 TNXAQ16473 311 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 PRSS8Q16651 343 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 SAMD12Q8N8I0 201 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 TEX45Q8NA69 505 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 OR5T1Q8NG75 326 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 OR13F1Q8NGS4 319 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 TCTEX1D2Q8WW35 142 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 DCUN1D4Q92564 292 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 SNAPC3Q92966 411 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 PHB2Q99623 299 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 DCUN1D5Q9BTE7 237 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 TAS2R8Q9NYW2 309 aa13.72□□□□□ -0.21
ITGB1-215ENST00000488494 TRIM64CA6NLI5 447 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 H3BUA1 57 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 APELAP0DMC3 54 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 AADACP22760 399 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 FCGR2CP31995 323 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 DEFA5Q01523 94 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 OR4S2Q8NH73 311 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 SECTM1Q8WVN6 248 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 ACOT12Q8WYK0 555 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 HSD17B10Q99714 261 aaKnown RBP13.71□□□□□ -0.21
ITGB1-215ENST00000488494 FUNDC2Q9BWH2 189 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 IFT46Q9NQC8 304 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 SCOCQ9UIL1 159 aa13.71□□□□□ -0.21
ITGB1-215ENST00000488494 OVOL1O14753 267 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 XRCC3O43542 346 aa13.7□□□□□ -0.22
ITGB1-215ENST00000488494 RAMP3O60896 148 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms