RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 RRASP10301 218 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 HIST1H1DP16402 221 aaKnown RBP9.6□□□□□ -0.87
SREBF1-215ENST00000487401 ARL6IP1Q15041 203 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 C22orf42Q6IC83 251 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 BVESQ8NE79 360 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 MAFIPQ8WZ33 124 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 HARBI1Q96MB7 349 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 TMEM68Q96MH6 324 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 ATG5Q9H1Y0 275 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 RANGRFQ9HD47 186 aaPredicted RBP9.6□□□□□ -0.87
SREBF1-215ENST00000487401 NDUFB11Q9NX14 153 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 COL7A1Q02388 2944 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 NBEAL2Q6ZNJ1 2754 aa9.6□□□□□ -0.87
SREBF1-215ENST00000487401 A0A0B4J203 849 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 SHISA3A0PJX4 238 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 RAB27BO00194 218 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 MFNGO00587 321 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 IGLV2-23P01705 113 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 GP9P14770 177 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 SPNP16150 400 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 ZP3P21754 424 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 PJVKQ0ZLH3 352 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 SRSF7Q16629 238 aaKnown RBP eCLIP9.59□□□□□ -0.87
SREBF1-215ENST00000487401 ADTRPQ96IZ2 230 aa9.59□□□□□ -0.87
SREBF1-215ENST00000487401 ANKRD34BA5PLL1 514 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 CCDC160A6NGH7 325 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 ZNF701M0R085 212 aaPredicted RBP9.58□□□□□ -0.88
SREBF1-215ENST00000487401 MRPS14O60783 128 aaKnown RBP9.58□□□□□ -0.88
SREBF1-215ENST00000487401 CRYGBP07316 175 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 GALP22466 123 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 VMA21Q3ZAQ7 101 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 CDNFQ49AH0 187 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 TMEM177Q53S58 311 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 ANKRD13BQ86YJ7 626 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 PHB2Q99623 299 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 RSRP1Q9BUV0 290 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 ST6GALNAC5Q9BVH7 336 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 RSL24D1Q9UHA3 163 aaKnown RBP9.58□□□□□ -0.88
SREBF1-215ENST00000487401 STUB1Q9UNE7 303 aa9.58□□□□□ -0.88
SREBF1-215ENST00000487401 SRRM4A7MD48 611 aaKnown RBP9.57□□□□□ -0.88
SREBF1-215ENST00000487401 J3QRK9 145 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 CTXN2P0C2S0 81 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 AADACP22760 399 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 DTYMKP23919 212 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 PSMB9P28065 219 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 GABARAPL2P60520 117 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 TATDN3Q17R31 274 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 Q6ZS49 121 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 OVCH2Q7RTZ1 564 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 GPR141Q7Z602 305 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 H1FOOQ8IZA3 346 aaPredicted RBP9.57□□□□□ -0.88
SREBF1-215ENST00000487401 TEX45Q8NA69 505 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 C5orf30Q96GV9 206 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 DCUN1D5Q9BTE7 237 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 COA4Q9NYJ1 87 aa9.57□□□□□ -0.88
SREBF1-215ENST00000487401 SMIM30A4D0T7 59 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 MSGN1A6NI15 193 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 NOTOA8MTQ0 251 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 MPPED1O15442 326 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 CRYZL1O95825 349 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 DUTP33316 252 aaKnown RBP9.56□□□□□ -0.88
SREBF1-215ENST00000487401 UBE2KP61086 200 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 SSBP2P81877 361 aaPredicted RBP9.56□□□□□ -0.88
SREBF1-215ENST00000487401 PRSS8Q16651 343 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 UBE2UQ5VVX9 321 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 SBSPONQ8IVN8 264 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 USMG5Q96IX5 58 aa9.56□□□□□ -0.88
SREBF1-215ENST00000487401 TINAGL1Q9GZM7 467 aaPredicted RBP9.56□□□□□ -0.88
SREBF1-215ENST00000487401 IGKV1D-8A0A087WSZ0 117 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 C3orf84H3BNL1 204 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 SCGNO76038 276 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 SLC22A5O76082 557 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 ACTL6BO94805 426 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 BRI3O95415 125 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 FRMD6-AS1P0C7T7 363 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 APELAP0DMC3 54 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 KLF5Q13887 457 aaPredicted RBP9.55□□□□□ -0.88
SREBF1-215ENST00000487401 TNXAQ16473 311 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 HACD4Q5VWC8 232 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 HAPLN4Q86UW8 402 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 NR2C2APQ86WQ0 139 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 SPARTQ8N0X7 666 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 OSR1Q8TAX0 266 aaPredicted RBP9.55□□□□□ -0.88
SREBF1-215ENST00000487401 ACOT12Q8WYK0 555 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 FCGR1BQ92637 280 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 DCSTAMPQ9H295 470 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 ZMAT4Q9H898 229 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 TXNL4BQ9NX01 149 aaKnown RBP9.55□□□□□ -0.88
SREBF1-215ENST00000487401 PEF1Q9UBV8 284 aaKnown RBP9.55□□□□□ -0.88
SREBF1-215ENST00000487401 DAPK2Q9UIK4 370 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 ELF5Q9UKW6 265 aaPredicted RBP9.55□□□□□ -0.88
SREBF1-215ENST00000487401 SSR3Q9UNL2 185 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 PRELID3BQ9Y3B1 194 aa9.55□□□□□ -0.88
SREBF1-215ENST00000487401 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
SREBF1-215ENST00000487401 LINC00473A8K010 186 aa9.54□□□□□ -0.88
SREBF1-215ENST00000487401 CREBL2O60519 120 aaPredicted RBP9.54□□□□□ -0.88
SREBF1-215ENST00000487401 TUSC2O75896 110 aa9.54□□□□□ -0.88
SREBF1-215ENST00000487401 NFYAP23511 347 aaPredicted RBP9.54□□□□□ -0.88
SREBF1-215ENST00000487401 FGF9P31371 208 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms