RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 GCSAMLQ5JQS6 135 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 C1orf194Q5T5A4 169 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 SLC35E4Q6ICL7 350 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 VASH2Q86V25 355 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 DERL1Q9BUN8 251 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 SNHG12Q9BXW3 62 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 HES4Q9HCC6 221 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 SMPD2O60906 423 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 WISP2O76076 250 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 CER1O95813 267 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 BMP5P22003 454 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 CD1BP29016 333 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 PLGLB1Q02325 96 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 FBXW9Q5XUX1 488 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 FIP1L1Q6UN15 594 aaKnown RBP10.19□□□□□ -0.78
COL3A1-206ENST00000487010 TMEM256Q8N2U0 113 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 ZNF114Q8NC26 417 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 NINJ1Q92982 152 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 DOCK7Q96N67 2140 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 ELOVL5Q9NYP7 299 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 POLR3KQ9Y2Y1 108 aaPredicted RBP10.19□□□□□ -0.78
COL3A1-206ENST00000487010 NUPR1O60356 82 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 CELA3BP08861 270 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 GCH1P30793 250 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 EDDM3BP56851 147 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 SOX8P57073 446 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 AESQ08117 197 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 GABRA6Q16445 453 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 SFRP2Q96HF1 295 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 NAGKQ9UJ70 344 aa10.19□□□□□ -0.78
COL3A1-206ENST00000487010 GTF3C1Q12789 2109 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 KIR2DL5BA0A0G2JN68 375 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 KIR2DL5BA0A0G2JPC4 375 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 A0A1B0GUS0 222 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 A0A1W2PPV4 95 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 PGPEP1LA6NFU8 196 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 TMEM210A6NLX4 147 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 LINC00473A8K010 186 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 SOX15O60248 233 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 SELEP16581 610 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 OR10J1P30954 320 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 LINC00205P59089 165 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 MRPL49Q13405 166 aaKnown RBP10.18□□□□□ -0.78
COL3A1-206ENST00000487010 PEAR1Q5VY43 1037 aaPredicted RBP10.18□□□□□ -0.78
COL3A1-206ENST00000487010 KIR2DL5AQ8N109 375 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 SGMS2Q8NHU3 365 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 COQ2Q96H96 371 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 QTRT1Q9BXR0 403 aaKnown RBP10.18□□□□□ -0.78
COL3A1-206ENST00000487010 USF3Q68DE3 2245 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 COL27A1Q8IZC6 1860 aaPredicted RBP10.18□□□□□ -0.78
COL3A1-206ENST00000487010 MDFIC2A0A1B0GVS7 189 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 MARCH11A6NNE9 402 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 IQCF6A8MYZ5 107 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 M0R143 59 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 WNT9BO14905 357 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 RBFOX2O43251 390 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL3A1-206ENST00000487010 TRIP6Q15654 476 aaKnown RBP10.18□□□□□ -0.78
COL3A1-206ENST00000487010 WDR31Q8NA23 367 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 SLC25A40Q8TBP6 338 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 MRGPRDQ8TDS7 321 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 MS4A10Q96PG2 267 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 HSD17B10Q99714 261 aaKnown RBP10.18□□□□□ -0.78
COL3A1-206ENST00000487010 TXNDC17Q9BRA2 123 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 ATG101Q9BSB4 218 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 CBLN4Q9NTU7 201 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 ABI3Q9P2A4 366 aa10.18□□□□□ -0.78
COL3A1-206ENST00000487010 TRBV20OR9-2A0A075B6H5 130 aa10.17□□□□□ -0.78
COL3A1-206ENST00000487010 OR9G9P0C7N8 305 aa10.17□□□□□ -0.78
COL3A1-206ENST00000487010 ADMP35318 185 aa10.17□□□□□ -0.78
COL3A1-206ENST00000487010 YPEL3P61236 119 aaPredicted RBP10.17□□□□□ -0.78
COL3A1-206ENST00000487010 PSG7Q13046 419 aa10.17□□□□□ -0.78
COL3A1-206ENST00000487010 Q6ZR03 302 aa10.17□□□□□ -0.78
COL3A1-206ENST00000487010 TCF23Q7RTU1 214 aa10.17□□□□□ -0.78
COL3A1-206ENST00000487010 IER2Q9BTL4 223 aa10.17□□□□□ -0.78
COL3A1-206ENST00000487010 PATZ1Q9HBE1 687 aaKnown RBP10.17□□□□□ -0.78
COL3A1-206ENST00000487010 DNAJC13O75165 2243 aa10.17□□□□□ -0.78
COL3A1-206ENST00000487010 MPDU1O75352 247 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 TDGF1P13385 188 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 KITLGP21583 273 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 OPRK1P41145 380 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 GABRA2P47869 451 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 AARDQ4LEZ3 155 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 LINC00696Q6ZRV3 163 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 ZNF826PQ6ZT77 177 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 C11orf53Q8IXP5 236 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 R3HDM4Q96D70 268 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 CHODLQ9H9P2 273 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 PTPRBP23467 1997 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 IGHV3-43A0A0B4J1X8 118 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 ARL14EPLP0DKL9 152 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 IGHV3-43DP0DP04 118 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 RAB4AP20338 218 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 MEOX1P50221 254 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 UBE2NP61088 152 aaKnown RBP10.16□□□□□ -0.78
COL3A1-206ENST00000487010 HOXA4Q00056 320 aaPredicted RBP10.16□□□□□ -0.78
COL3A1-206ENST00000487010 TREML4Q6UXN2 200 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 CXorf67Q86X51 503 aaPredicted RBP10.16□□□□□ -0.78
COL3A1-206ENST00000487010 ZCCHC14Q8WYQ9 949 aaKnown RBP10.16□□□□□ -0.78
COL3A1-206ENST00000487010 ZPBPQ9BS86 351 aa10.16□□□□□ -0.78
COL3A1-206ENST00000487010 SPRY4Q9C004 299 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms