RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 SULT1C2O00338 296 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 CA2P00918 260 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 RPL30P62888 115 aaKnown RBP11.6□□□□□ -0.55
USP4-212ENST00000486549 NDPQ00604 133 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 DEFA6Q01524 100 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 DYRK1AQ13627 763 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 ECSCRQ19T08 205 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 TMEM177Q53S58 311 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 LCNL1Q6ZST4 164 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 OVCH2Q7RTZ1 564 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 LYSMD2Q8IV50 215 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 OR52I2Q8NH67 350 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 GIMAP1Q8WWP7 306 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 ABHD1Q96SE0 405 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 GON7Q9BXV9 100 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 SLIRPQ9GZT3 109 aaKnown RBP11.6□□□□□ -0.55
USP4-212ENST00000486549 PRELID3BQ9Y3B1 194 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 A3GALT2U3KPV4 340 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 CMYA5Q8N3K9 4069 aa11.6□□□□□ -0.55
USP4-212ENST00000486549 G3V318 75 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 WIPF1O43516 503 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 IGLV2-23P01705 113 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 IGF1P05019 195 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 PF4V1P10720 104 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 LGALS7P47929 136 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 GNB1P62873 340 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 CX3CL1P78423 397 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 TEX38Q6PEX7 206 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 MFSD4AQ8N468 514 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 COMMD1Q8N668 190 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 OR4F17Q8NGA8 305 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 MCFD2Q8NI22 146 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 DIRAS2Q96HU8 199 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 OR4F4Q96R69 305 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 HSD17B10Q99714 261 aaKnown RBP11.59□□□□□ -0.55
USP4-212ENST00000486549 FAM103A1Q9BTL3 118 aaKnown RBP11.59□□□□□ -0.55
USP4-212ENST00000486549 RBM38Q9H0Z9 239 aaKnown RBP11.59□□□□□ -0.55
USP4-212ENST00000486549 RSL24D1Q9UHA3 163 aaKnown RBP11.59□□□□□ -0.55
USP4-212ENST00000486549 FBXO7Q9Y3I1 522 aa11.59□□□□□ -0.55
USP4-212ENST00000486549 TRAV41A0A0B4J266 112 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 SRRM4A7MD48 611 aaKnown RBP11.58□□□□□ -0.56
USP4-212ENST00000486549 M0QYG6 137 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 TSPAN5P62079 268 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 EIF4EBP1Q13541 118 aaPredicted RBP11.58□□□□□ -0.56
USP4-212ENST00000486549 IL18Q14116 193 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 VMA21Q3ZAQ7 101 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 CXorf66Q5JRM2 361 aaPredicted RBP11.58□□□□□ -0.56
USP4-212ENST00000486549 ZNF660Q6AZW8 331 aaPredicted RBP11.58□□□□□ -0.56
USP4-212ENST00000486549 ZNF66Q6ZN08 573 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 ZNF818PQ6ZRF7 136 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 C15orf40Q8WUR7 153 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 FCAMRQ8WWV6 532 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 MOB3AQ96BX8 217 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 FXYD6Q9H0Q3 95 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 KLK11Q9UBX7 282 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 MEGF8Q7Z7M0 2845 aa11.58□□□□□ -0.56
USP4-212ENST00000486549 NUDT19A8MXV4 375 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 RPLP1P05386 114 aaKnown RBP11.57□□□□□ -0.56
USP4-212ENST00000486549 RPL23AP62750 156 aaKnown RBP11.57□□□□□ -0.56
USP4-212ENST00000486549 DGCR2P98153 550 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 CFHR3Q02985 330 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 PJVKQ0ZLH3 352 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 MSMO1Q15800 293 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 PDLIM3Q53GG5 364 aaPredicted RBP11.57□□□□□ -0.56
USP4-212ENST00000486549 DHRS11Q6UWP2 260 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 IDO2Q6ZQW0 420 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 C18orf65Q6ZTR6 163 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 PPP1R27Q86WC6 154 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 ZBTB34Q8NCN2 500 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 OR6F1Q8NGZ6 308 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 OR4S2Q8NH73 311 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 GRPEL2Q8TAA5 225 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 OSR1Q8TAX0 266 aaPredicted RBP11.57□□□□□ -0.56
USP4-212ENST00000486549 ARPC1AQ92747 370 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 ZNF580Q9UK33 172 aa11.57□□□□□ -0.56
USP4-212ENST00000486549 TPPPO94811 219 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 CNIH1O95406 144 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 PF4P02776 101 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 CRYGBP07316 175 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 SAA1P0DJI8 122 aaPredicted RBP11.56□□□□□ -0.56
USP4-212ENST00000486549 UBE2KP61086 200 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 CATR1Q13166 79 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 FOXE3Q13461 319 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 FXYD3Q14802 87 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 ACTBL2Q562R1 376 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 AADACL3Q5VUY0 350 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 KLHL30-AS1Q8NEE0 82 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 OR51H1Q8NH63 302 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 TINAGL1Q9GZM7 467 aaPredicted RBP11.56□□□□□ -0.56
USP4-212ENST00000486549 MTFP1Q9UDX5 166 aa11.56□□□□□ -0.56
USP4-212ENST00000486549 A0A1W2PN81 502 aa11.55□□□□□ -0.56
USP4-212ENST00000486549 GABARAPH6UMI1 98 aa11.55□□□□□ -0.56
USP4-212ENST00000486549 ARPC1BO15143 372 aaKnown RBP11.55□□□□□ -0.56
USP4-212ENST00000486549 IGHG4P01861 327 aa11.55□□□□□ -0.56
USP4-212ENST00000486549 CD3DP04234 171 aa11.55□□□□□ -0.56
USP4-212ENST00000486549 RLN1P04808 185 aa11.55□□□□□ -0.56
USP4-212ENST00000486549 ELANEP08246 267 aa11.55□□□□□ -0.56
USP4-212ENST00000486549 PPIFP30405 207 aaKnown RBP11.55□□□□□ -0.56
USP4-212ENST00000486549 GNRHRP30968 328 aa11.55□□□□□ -0.56
USP4-212ENST00000486549 CHRNA7P36544 502 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms