RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 MS4A10Q96PG2 267 aa14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 ALX4Q9H161 411 aaPredicted RBP14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 SLA2Q9H6Q3 261 aa14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 OR2W1Q9Y3N9 320 aa14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 ETV7Q9Y603 341 aa14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 J3QRK9 145 aa14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 SSX5O60225 188 aa14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 CNIH1O95406 144 aa14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 HLA-DQB1P01920 261 aa14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 LGALS1P09382 135 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 INSL3P51460 131 aa14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 SSBP2P81877 361 aaPredicted RBP14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 PJVKQ0ZLH3 352 aa14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 DCTN2Q13561 401 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 GRPEL2Q8TAA5 225 aa14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 RHOVQ96L33 236 aa14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 TMEM68Q96MH6 324 aa14.25□□□□□ -0.13
PRPF40A-209ENST00000486100 LINC00473A8K010 186 aa14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 LINC01619G3V211 115 aa14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 TMEM127O75204 238 aa14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 SLC22A5O76082 557 aa14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 NFYAP23511 347 aaPredicted RBP14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 ZNF645Q8N7E2 425 aa14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 TEX45Q8NA69 505 aa14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 DCUN1D4Q92564 292 aa14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 SLC25A38Q96DW6 304 aa14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 ANXA10Q9UJ72 324 aa14.24□□□□□ -0.13
PRPF40A-209ENST00000486100 TRAV18A0A075B6X5 111 aa14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 A0A0A6YYH2 397 aa14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 A6NJ64 397 aa14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 OVOL1O14753 267 aa14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 ECI1P42126 302 aa14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 TPPP2P59282 170 aa14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 VMA21Q3ZAQ7 101 aa14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 TIMM50Q3ZCQ8 353 aa14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 OR5T1Q8NG75 326 aa14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 OSR1Q8TAX0 266 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 DLX4Q92988 240 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-209ENST00000486100 H3BUA1 57 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 CRYZL1O95825 349 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 IGHV3-11P01762 117 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 TRGV3P03979 118 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 HSPB1P04792 205 aaKnown RBP14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 UBE2KP61086 200 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 MRGPRG-AS1Q2M3A8 158 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 ZNF429Q86V71 674 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 POC5Q8NA72 575 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 DIABLOQ9NR28 239 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 ZNF355PQ9NSJ1 428 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 SPATA2Q9UM82 520 aa14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 RBMX2Q9Y388 322 aaKnown RBP14.22□□□□□ -0.13
PRPF40A-209ENST00000486100 IGHV4OR15-8A0A075B7B6 117 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 A0A087WW49 117 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 A0A087WXM4 84 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 TUSC2O75896 110 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 IGLV2-14P01704 120 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 SLURP1P55000 103 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 CROCCP3Q8IVE0 287 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 TSPAN14Q8NG11 270 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 B9D2Q9BPU9 175 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 PRELID3BQ9Y3B1 194 aa14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 LSM4Q9Y4Z0 139 aaKnown RBP14.21□□□□□ -0.13
PRPF40A-209ENST00000486100 IGKV1D-13A0A0B4J2D9 117 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 A0A0G2JLM5 398 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 AIREO43918 545 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 FCGR3BO75015 233 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 BRI3O95415 125 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 IGKV1-13P0DP09 117 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 CD69Q07108 199 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 PRSS8Q16651 343 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 HOGA1Q86XE5 327 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 BEST4Q8NFU0 473 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 YIPF6Q96EC8 236 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 PRR25Q96S07 402 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 AUNIPQ9H7T9 357 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 VCX3AQ9NNX9 186 aa14.2□□□□□ -0.14
PRPF40A-209ENST00000486100 MSGN1A6NI15 193 aa14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 TNFAIP8O95379 198 aa14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 TGFBR1P36897 503 aa14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 RPL30P62888 115 aaKnown RBP14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 KCTD9Q7L273 389 aa14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 OVCH2Q7RTZ1 564 aa14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 GVQW1Q8N7I0 195 aa14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 HSD17B10Q99714 261 aaKnown RBP14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 DCUN1D5Q9BTE7 237 aa14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 ZNF256Q9Y2P7 627 aaPredicted RBP14.19□□□□□ -0.14
PRPF40A-209ENST00000486100 C13orf42A0A1B0GVH6 325 aa14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 AADACP22760 399 aa14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 RPS19P39019 145 aaKnown RBP14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 ARPC4P59998 168 aa14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 EIF4EBP1Q13541 118 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 TNXAQ16473 311 aa14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 VAX1Q5SQQ9 334 aa14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 ACSM6Q6P461 480 aa14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 IDO2Q6ZQW0 420 aa14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 PHB2Q99623 299 aa14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 TINAGL1Q9GZM7 467 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 RANGRFQ9HD47 186 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 MRPS7Q9Y2R9 242 aaKnown RBP14.18□□□□□ -0.14
PRPF40A-209ENST00000486100 DNAH9Q9NYC9 4486 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms