RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 PPP1R1AQ13522 171 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 TMEM187Q14656 261 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 DHRS7BQ6IAN0 325 aaPredicted RBP12.67□□□□□ -0.38
APOE-205ENST00000485628 PLET1Q6UQ28 207 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 TMEM86BQ8N661 226 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 OR51H1Q8NH63 302 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 CD300LFQ8TDQ1 290 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 EAF1Q96JC9 268 aaPredicted RBP12.67□□□□□ -0.38
APOE-205ENST00000485628 SLC35D1Q9NTN3 355 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 PRELID3BQ9Y3B1 194 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 TRAV6A0A075B6T7 132 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 TEX13DA0A0J9YY54 714 aaPredicted RBP12.66□□□□□ -0.38
APOE-205ENST00000485628 C9orf170A2RU37 121 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
APOE-205ENST00000485628 SFT2D2O95562 160 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 CDS2O95674 445 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 IGLV2-23P01705 113 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 SNRNP70P08621 437 aaKnown RBP12.66□□□□□ -0.38
APOE-205ENST00000485628 OR4E1P0C645 316 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 AKR1C4P17516 323 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 ARHGDIBP52566 201 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 SCGB2A2Q13296 93 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 SPAG16Q8N0X2 631 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 SIGLECL1Q8N7X8 197 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 MINDY2Q8NBR6 621 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 NPBQ8NG41 125 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 TCTEX1D2Q8WW35 142 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 TMEM56Q96MV1 263 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 TMEM222Q9H0R3 208 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 PLEKHA2Q9HB19 425 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 LIN7CQ9NUP9 197 aaKnown RBP12.66□□□□□ -0.38
APOE-205ENST00000485628 POMT1Q9Y6A1 747 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 TMEM56-RWDD3S4R434 201 aa12.66□□□□□ -0.38
APOE-205ENST00000485628 INMT-MINDY4F8WBC2 141 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 CLDN34H7C241 214 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 FCGR3BO75015 233 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 MOSP00540 346 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 IGKV1D-33P01593 117 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 IGKV1-33P01594 117 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 APOA2P02652 100 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 CRYGBP07316 175 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 OR5AC1P0C628 307 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 P0C879 139 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 FAM106CPP0CH98 169 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 CD24P25063 80 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 DHRS2Q13268 280 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 SGPP2Q8IWX5 399 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 OR4C13Q8NGP0 309 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 OR2T10Q8NGZ9 312 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 LHFPL5Q8TAF8 219 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 OSR1Q8TAX0 266 aaPredicted RBP12.65□□□□□ -0.38
APOE-205ENST00000485628 ESM1Q9NQ30 184 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 TCF19Q9Y242 345 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 TNCP24821 2201 aa12.65□□□□□ -0.38
APOE-205ENST00000485628 A0A0B4J293 547 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 H3BUX3 64 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 NDUFA3O95167 84 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 DUS4LO95620 317 aaKnown RBP12.64□□□□□ -0.39
APOE-205ENST00000485628 HPRT1P00492 218 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 IGHV4-59P01825 116 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 RPA2P15927 270 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 LGALS7P47929 136 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 F2RL1P55085 397 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 RTL8BQ17RB0 113 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 MRGPRG-AS1Q2M3A8 158 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 SP6Q3SY56 376 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 LYG2Q86SG7 212 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 OR4S2Q8NH73 311 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 OR5R1Q8NH85 324 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 FLYWCH2Q96CP2 140 aaKnown RBP12.64□□□□□ -0.39
APOE-205ENST00000485628 KCNIP3Q9Y2W7 256 aa12.64□□□□□ -0.39
APOE-205ENST00000485628 NIPBLQ6KC79 2804 aaeCLIP12.63□□□□□ -0.39
APOE-205ENST00000485628 A0A0B4J2A0 478 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 C7orf66A4D0T2 115 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 CRYZL1O95825 349 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 AMY1AP04745 511 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 LPAR6P43657 344 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 HILS1P60008 231 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 SLC9A3R2Q15599 337 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 ANKRD55Q3KP44 614 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 LIAT1Q6ZQX7 453 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 SELENOHQ8IZQ5 122 aaKnown RBP12.63□□□□□ -0.39
APOE-205ENST00000485628 PUSL1Q8N0Z8 303 aaKnown RBP12.63□□□□□ -0.39
APOE-205ENST00000485628 MITD1Q8WV92 249 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 IL22RA2Q969J5 263 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 SEC22AQ96IW7 307 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 RBM14Q96PK6 669 aaKnown RBP12.63□□□□□ -0.39
APOE-205ENST00000485628 COMMD9Q9P000 198 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 SHPKQ9UHJ6 478 aa12.63□□□□□ -0.39
APOE-205ENST00000485628 A0A0A6YYJ9 748 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 DBX1A6NMT0 343 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 HOXA3O43365 443 aaPredicted RBP12.62□□□□□ -0.39
APOE-205ENST00000485628 PRAF2O60831 178 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 OR2F2O95006 317 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 S1PR2O95136 353 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 IFNA2P01563 188 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms