RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 OR2D2Q9H210 308 aa8.12□□□□□ -1.11
HMGN1-215ENST00000485550 EDA2RQ9HAV5 297 aa8.12□□□□□ -1.11
HMGN1-215ENST00000485550 ACOT13Q9NPJ3 140 aa8.12□□□□□ -1.11
HMGN1-215ENST00000485550 SDHAF2Q9NX18 166 aa8.12□□□□□ -1.11
HMGN1-215ENST00000485550 RAB22AQ9UL26 194 aa8.12□□□□□ -1.11
HMGN1-215ENST00000485550 SHISA3A0PJX4 238 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 SMIM30A4D0T7 59 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 J3QRK9 145 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 JTBO76095 146 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 SPDEFO95238 335 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 IGLV2-23P01705 113 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 FCGR3AP08637 254 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 APELAP0DMC3 54 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 PSMD7P51665 324 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 SSBP2P81877 361 aaPredicted RBP8.11□□□□□ -1.11
HMGN1-215ENST00000485550 POC5Q8NA72 575 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 BVESQ8NE79 360 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 OR4A4PQ8NGN8 299 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 OR6Q1Q8NGQ2 317 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 OR10R2Q8NGX6 335 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 OR10J5Q8NHC4 309 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 C5orf30Q96GV9 206 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 CNBD2Q96M20 576 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 SLA2Q9H6Q3 261 aa8.11□□□□□ -1.11
HMGN1-215ENST00000485550 RBM7Q9Y580 266 aaKnown RBP8.11□□□□□ -1.11
HMGN1-215ENST00000485550 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
HMGN1-215ENST00000485550 TRBV6-7A0A0A0MS04 114 aa8.1□□□□□ -1.11
HMGN1-215ENST00000485550 C13orf42A0A1B0GVH6 325 aa8.1□□□□□ -1.11
HMGN1-215ENST00000485550 RBMY1BA6NDE4 496 aaKnown RBP8.1□□□□□ -1.11
HMGN1-215ENST00000485550 RBMY1EA6NEQ0 496 aaKnown RBP8.1□□□□□ -1.11
HMGN1-215ENST00000485550 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
HMGN1-215ENST00000485550 PDCD5O14737 125 aa8.1□□□□□ -1.11
HMGN1-215ENST00000485550 SHOXO15266 292 aa8.1□□□□□ -1.11
HMGN1-215ENST00000485550 RBMY1DP0C7P1 496 aaKnown RBP8.1□□□□□ -1.11
HMGN1-215ENST00000485550 SERPINB10P48595 397 aa8.1□□□□□ -1.11
HMGN1-215ENST00000485550 SSX1Q16384 188 aa8.1□□□□□ -1.11
HMGN1-215ENST00000485550 HARBI1Q96MB7 349 aa8.1□□□□□ -1.11
HMGN1-215ENST00000485550 ELOVL1Q9BW60 279 aa8.1□□□□□ -1.11
HMGN1-215ENST00000485550 ELF5Q9UKW6 265 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-215ENST00000485550 IGKV1D-8A0A087WSZ0 117 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 IFITM5A6NNB3 132 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 RAB27BO00194 218 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 CRYGBP07316 175 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 HIST1H1DP16402 221 aaKnown RBP8.09□□□□□ -1.11
HMGN1-215ENST00000485550 GADD45AP24522 165 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 TALDO1P37837 337 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 LGALS7P47929 136 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 ARFRP1Q13795 201 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 IZUMO2Q6UXV1 221 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 IDO2Q6ZQW0 420 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 ANKRD13BQ86YJ7 626 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.09□□□□□ -1.11
HMGN1-215ENST00000485550 PHB2Q99623 299 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 TM2D3Q9BRN9 247 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 GINS4Q9BRT9 223 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 CABLES2Q9BTV7 478 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 RANGRFQ9HD47 186 aaPredicted RBP8.09□□□□□ -1.11
HMGN1-215ENST00000485550 COA4Q9NYJ1 87 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 ADAM30Q9UKF2 790 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 FRAS1Q86XX4 4008 aa8.09□□□□□ -1.11
HMGN1-215ENST00000485550 TRAV1-2A0A0B4J238 106 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 MSGN1A6NI15 193 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 MFNGO00587 321 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 RBMXL2O75526 392 aaKnown RBP8.08□□□□□ -1.12
HMGN1-215ENST00000485550 TRBV12-3P01733 135 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 RAB3BP20337 219 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 MYL9P24844 172 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 RANBP1P43487 201 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 SYNJ2BPP57105 145 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 TAGLNQ01995 201 aaKnown RBP8.08□□□□□ -1.12
HMGN1-215ENST00000485550 CBX3Q13185 183 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 TBCEQ15813 527 aaPredicted RBP8.08□□□□□ -1.12
HMGN1-215ENST00000485550 TNXAQ16473 311 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 RTL8BQ17RB0 113 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 MRGPRG-AS1Q2M3A8 158 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 TMEM177Q53S58 311 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 C22orf42Q6IC83 251 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 ZNF367Q7RTV3 350 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 ST6GALNAC5Q9BVH7 336 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 ATG5Q9H1Y0 275 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 STUB1Q9UNE7 303 aa8.08□□□□□ -1.12
HMGN1-215ENST00000485550 ELOA3CA0A087WX78 387 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-215ENST00000485550 A0A0G2JLM5 398 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 METTL21EPA6NDL7 271 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 LINC00473A8K010 186 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 H3BUA1 57 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 MPPED1O15442 326 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 CRYZL1O95825 349 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 IGLV1-51P01701 117 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 PRH1P02810 166 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 IGHV4-30-4P0DP06 118 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 ZP3P21754 424 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 DUTP33316 252 aaKnown RBP8.07□□□□□ -1.12
HMGN1-215ENST00000485550 KLF5Q13887 457 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-215ENST00000485550 CDNFQ49AH0 187 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 NR2C2APQ86WQ0 139 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 Q8N1Y9 231 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 ACOT12Q8WYK0 555 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 DCUN1D5Q9BTE7 237 aa8.07□□□□□ -1.12
HMGN1-215ENST00000485550 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms