RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 SERPINB10P48595 397 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 C2orf76Q3KRA6 126 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 PLAC9Q5JTB6 97 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 HES5Q5TA89 166 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ANKRD13BQ86YJ7 626 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 OR5T1Q8NG75 326 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 OR4A4PQ8NGN8 299 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 OR2D2Q9H210 308 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 TMEM272A0A1B0GTI8 110 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ANKRD34BA5PLL1 514 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ZP3P21754 424 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 GADD45AP24522 165 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 RANBP1P43487 201 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 HAGHQ16775 308 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 TIMM50Q3ZCQ8 353 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SGPP2Q8IWX5 399 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 RAB3CQ96E17 227 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 HARBI1Q96MB7 349 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 OR51E2Q9H255 320 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 RANGRFQ9HD47 186 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 V9GY05 133 aa11.72□□□□□ -0.53
HLA-DQB1-208ENST00000484729 H3BUA1 57 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 PDCD5O14737 125 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 IGLV2-23P01705 113 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 FCGR3AP08637 254 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SSBP2P81877 361 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 PJVKQ0ZLH3 352 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 PLA2G7Q13093 441 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 CBX3Q13185 183 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 IGSF11Q5DX21 431 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 OR10J5Q8NHC4 309 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 CABLES2Q9BTV7 478 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 RETNQ9HD89 108 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 TXNL4BQ9NX01 149 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SDHAF2Q9NX18 166 aa11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 RBM7Q9Y580 266 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-208ENST00000484729 PLECQ15149 4684 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 A0A075B6Q4 140 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TRAV1-2A0A0B4J238 106 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 A0A0G2JLM5 398 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RBMY1BA6NDE4 496 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RBMY1EA6NEQ0 496 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 A8MZ25 164 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 SHOXO15266 292 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 IGLV1-51P01701 117 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 IFNA6P05013 189 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RBMY1DP0C7P1 496 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 FGF9P31371 208 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 LGALS7P47929 136 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 DEFA5Q01523 94 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 MOGAT2Q3SYC2 334 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 BVESQ8NE79 360 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 MAFIPQ8WZ33 124 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 PHB2Q99623 299 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RAB22AQ9UL26 194 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 KCNK7Q9Y2U2 307 aa11.7□□□□□ -0.54
HLA-DQB1-208ENST00000484729 AIREO43918 545 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 GSTT2P0CG29 244 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 GSTT2BP0CG30 244 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 GNB3P16520 340 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RAB3BP20337 219 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 PSMD7P51665 324 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RTL8BQ17RB0 113 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 YIPF6Q96EC8 236 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 C5orf30Q96GV9 206 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TMEM68Q96MH6 324 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 GINS4Q9BRT9 223 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 COA4Q9NYJ1 87 aa11.69□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TNCP24821 2201 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TRBV6-7A0A0A0MS04 114 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 SMIM30A4D0T7 59 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 CRYGBP07316 175 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 APELAP0DMC3 54 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 HIST1H1DP16402 221 aaKnown RBP11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 AADACP22760 399 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 OR10A3P58181 314 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 VMA21Q3ZAQ7 101 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TMEM177Q53S58 311 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 GPR141Q7Z602 305 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 OR9G4Q8NGQ1 327 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 OR13F1Q8NGS4 319 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 OR10R2Q8NGX6 335 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 FAM110AQ9BQ89 295 aa11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TINAGL1Q9GZM7 467 aaPredicted RBP11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 ZNF230Q9UIE0 474 aaPredicted RBP11.68□□□□□ -0.54
HLA-DQB1-208ENST00000484729 SHISA3A0PJX4 238 aa11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 MFNGO00587 321 aa11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RRASP10301 218 aa11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 LSM3P62310 102 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TAGLNQ01995 201 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 ARFRP1Q13795 201 aa11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 KLF5Q13887 457 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 CENPOQ9BU64 300 aa11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 FUNDC2Q9BWH2 189 aa11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RNF167Q9H6Y7 350 aa11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 ALMS1Q8TCU4 4167 aa11.67□□□□□ -0.54
HLA-DQB1-208ENST00000484729 A0A0B4J203 849 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 SRRM4A7MD48 611 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms