RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TMEM186Q96B77 213 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 C1orf159Q96HA4 380 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 ADTRPQ96IZ2 230 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 LPAR2Q9HBW0 351 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 PLSCR3Q9NRY6 295 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 OR5AC2Q9NZP5 309 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 INSIG2Q9Y5U4 225 aa8.19□□□□□ -1.1
HDAC6-226ENST00000483656 PDZD2O15018 2839 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 FXYD6-FXYD2A0A087WZ82 144 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 A0A1B0GU03 582 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 HMSDA8MTL9 139 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 H0YJW9 148 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 K7EPK0 472 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 HPRT1P00492 218 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 KRASP01116 189 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 SLC25A6P12236 298 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 HOXB4P17483 251 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-226ENST00000483656 EPHA1P21709 976 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 USF1P22415 310 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-226ENST00000483656 KIR2DS2P43631 304 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 PAX8Q06710 450 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 FGL1Q08830 312 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 MIDNQ504T8 468 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 CXorf66Q5JRM2 361 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-226ENST00000483656 TMEM65Q6PI78 240 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 FAM71E2Q8N5Q1 922 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 OR5AN1Q8NGI8 311 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 OR1S1Q8NH92 325 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 CD300LFQ8TDQ1 290 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 C11orf1Q9H5F2 150 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 HEXA-AS1Q9H8Q6 139 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 PLEKHA2Q9HB19 425 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 SLC35D1Q9NTN3 355 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 COMMD9Q9P000 198 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 MBD2Q9UBB5 411 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 PRELID3BQ9Y3B1 194 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 MMP24Q9Y5R2 645 aa8.18□□□□□ -1.1
HDAC6-226ENST00000483656 PIGBOS1A0A0B4J2F0 54 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 KCNAB3O43448 404 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 TOX4O94842 621 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 CRYZL1O95825 349 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 ARG1P05089 322 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 IL3RAP26951 378 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 AKR1C2P52895 323 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 ID3Q02535 119 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 SMCO1Q147U7 214 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 PRSS54Q6PEW0 395 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 TGIF2LXQ8IUE1 241 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 DMBX1Q8NFW5 382 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 OR4S2Q8NH73 311 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 R3HDM4Q96D70 268 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 RRNAD1Q96FB5 475 aaKnown RBP8.17□□□□□ -1.1
HDAC6-226ENST00000483656 SPIN2AQ99865 258 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 SPIN2BQ9BPZ2 258 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 PCGF1Q9BSM1 259 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 CACNG5Q9UF02 275 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 TNFSF18Q9UNG2 199 aa8.17□□□□□ -1.1
HDAC6-226ENST00000483656 A0A1W2PRD5 423 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 A0A1W2PRF3 423 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 A0A1W2PRM7 423 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 RNF222A6NCQ9 220 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 SRRM4A7MD48 611 aaKnown RBP8.16□□□□□ -1.1
HDAC6-226ENST00000483656 ARPC5O15511 151 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 DEDDO75618 318 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 SCGB1D2O95969 90 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 IGKV1-16P04430 117 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 IL6RP08887 468 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-226ENST00000483656 OR9G9P0C7N8 305 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 S100A10P60903 97 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 POLR2GP62487 172 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC6-226ENST00000483656 POU2AF1Q16633 256 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 TMEM177Q53S58 311 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 Q5PR19 223 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 TPTE2P1Q5T6R2 138 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 THOC7Q6I9Y2 204 aaKnown RBP8.16□□□□□ -1.1
HDAC6-226ENST00000483656 LHFPL4Q7Z7J7 247 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 ZNF546Q86UE3 836 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 FOXRED2Q8IWF2 684 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 PDZD9Q8IXQ8 264 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 VKORC1L1Q8N0U8 176 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 RNASE11Q8TAA1 199 aaKnown RBP8.16□□□□□ -1.1
HDAC6-226ENST00000483656 THAP6Q8TBB0 222 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 AJUBAQ96IF1 538 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 DPM3Q9P2X0 92 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 RCL1Q9Y2P8 373 aaKnown RBP8.16□□□□□ -1.1
HDAC6-226ENST00000483656 AMMECR1Q9Y4X0 333 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-226ENST00000483656 LSM5Q9Y4Y9 91 aaKnown RBP8.16□□□□□ -1.1
HDAC6-226ENST00000483656 HSPB11Q9Y547 144 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 POMT1Q9Y6A1 747 aa8.16□□□□□ -1.1
HDAC6-226ENST00000483656 ITPR2Q14571 2701 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 IGHV3-72A0A0B4J1Y9 119 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 TRAV3A0A0B4J244 114 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 IGHV1-3A0A0C4DH29 117 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 A0A1W2PPI3 338 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 MSGN1A6NI15 193 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 MARCH11A6NNE9 402 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 RNF223E7ERA6 249 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 ST8SIA3O43173 380 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 ATG12O94817 140 aa8.15□□□□□ -1.1
HDAC6-226ENST00000483656 NXPH3O95157 252 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms