RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 TRRAPQ9Y4A5 3859 aa13.08□□□□□ -0.32
HMGN1-214ENST00000482733 IGHV7-81A0A0B4J1V7 117 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 TCRBV4S1A1TA0A5B7 111 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 TBPP20226 339 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 KIR2DS2P43631 304 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 TSPAN5P62079 268 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 EIF4EBP1Q13541 118 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-214ENST00000482733 IL18Q14116 193 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 VAX1Q5SQQ9 334 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 TEX38Q6PEX7 206 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 ZNF329Q86UD4 541 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 MFSD4AQ8N468 514 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 TCTEX1D2Q8WW35 142 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 DCUN1D5Q9BTE7 237 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 MMP27Q9H306 513 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 TAS2R8Q9NYW2 309 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
HMGN1-214ENST00000482733 TSSC4Q9Y5U2 329 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-214ENST00000482733 CTDSPLO15194 276 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 SLC25A17O43808 307 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 FCGR3BO75015 233 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 CRYZL1O95825 349 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 IGLV2-23P01705 113 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 RPL30P62888 115 aaKnown RBP13.06□□□□□ -0.32
HMGN1-214ENST00000482733 CATR1Q13166 79 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 VMA21Q3ZAQ7 101 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 RNASE12Q5GAN4 147 aaKnown RBP13.06□□□□□ -0.32
HMGN1-214ENST00000482733 TREML4Q6UXN2 200 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 ZNF562Q6V9R5 426 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 TMEM17Q86X19 198 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 OR4S2Q8NH73 311 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 PARP11Q9NR21 331 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 KLK11Q9UBX7 282 aa13.06□□□□□ -0.32
HMGN1-214ENST00000482733 IFNA6P05013 189 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 TNFSF8P32971 234 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 TAS2R19P59542 299 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 UBE2KP61086 200 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 CX3CL1P78423 397 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 NSUN5P1Q3KNT7 163 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 RNASE10Q5GAN6 216 aaKnown RBP13.05□□□□□ -0.32
HMGN1-214ENST00000482733 TCTEX1D4Q5JR98 221 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 LPCAT3Q6P1A2 487 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 C10orf99Q6UWK7 81 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 ZNF818PQ6ZRF7 136 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 PPP1R27Q86WC6 154 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 TEX45Q8NA69 505 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 TMEM229BQ8NBD8 167 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 OR4F17Q8NGA8 305 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 SMIM4Q8WVI0 70 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 DGCR14Q96DF8 476 aaKnown RBP13.05□□□□□ -0.32
HMGN1-214ENST00000482733 OR4F4Q96R69 305 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 ZFP57Q9NU63 452 aa13.05□□□□□ -0.32
HMGN1-214ENST00000482733 FABP12A6NFH5 140 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 FCN1O00602 326 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 ATP6V0E1O15342 81 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 CA2P00918 260 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 CRYGBP07316 175 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 ELANEP08246 267 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 GNRHRP30968 328 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 S100A5P33763 92 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 CRIP2P52943 208 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-214ENST00000482733 DGCR2P98153 550 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 CFHR3Q02985 330 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 TMEM267Q0VDI3 215 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-214ENST00000482733 CMTM1Q8IZ96 169 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 ARRDC1Q8N5I2 433 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 CLCC1Q96S66 551 aa13.04□□□□□ -0.32
HMGN1-214ENST00000482733 TRAV41A0A0B4J266 112 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 SRRM4A7MD48 611 aaKnown RBP13.03□□□□□ -0.32
HMGN1-214ENST00000482733 RBFOX2O43251 390 aaKnown RBP eCLIP13.03□□□□□ -0.32
HMGN1-214ENST00000482733 TNFSF12O43508 249 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 CREBL2O60519 120 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-214ENST00000482733 TSPAN15O95858 294 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 IGHG4P01861 327 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 CD3DP04234 171 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 S100GP29377 79 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 UCP3P55916 312 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 FOXE3Q13461 319 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 OR2B11Q5JQS5 317 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 CXorf66Q5JRM2 361 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-214ENST00000482733 KHDC1LQ5JSQ8 128 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 HIST2H2BDQ6DRA6 164 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 TCTEX1D1Q8N7M0 179 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 POC5Q8NA72 575 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 CD300LFQ8TDQ1 290 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 SOSTQ9BQB4 213 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 AIFM2Q9BRQ8 373 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 FXYD6Q9H0Q3 95 aa13.03□□□□□ -0.32
HMGN1-214ENST00000482733 ADARB2-AS1A8MUL3 147 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 M0QYG6 137 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 GPR31O00270 319 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 GSTZ1O43708 216 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-214ENST00000482733 HRASP01112 189 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 CD74P04233 296 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 SLC6A1P30531 599 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 NDPQ00604 133 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 FXYD3Q14802 87 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 AADACL3Q5VUY0 350 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 SLC38A6Q8IZM9 456 aa13.02□□□□□ -0.33
HMGN1-214ENST00000482733 SPAG16Q8N0X2 631 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms