RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TMEM17Q86X19 198 aa16.49■□□□□ 0.23
SEC13-217ENST00000482647 MFSD4AQ8N468 514 aa16.49■□□□□ 0.23
SEC13-217ENST00000482647 HARBI1Q96MB7 349 aa16.49■□□□□ 0.23
SEC13-217ENST00000482647 OR51J1Q9H342 316 aa16.49■□□□□ 0.23
SEC13-217ENST00000482647 IGHV7-81A0A0B4J1V7 117 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 FABP12A6NFH5 140 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 CTDSPLO15194 276 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 CRYZL1O95825 349 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 IFNA6P05013 189 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 TBPP20226 339 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 RPL30P62888 115 aaKnown RBP16.48■□□□□ 0.23
SEC13-217ENST00000482647 DGCR2P98153 550 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 CD83Q01151 205 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 SSBP1Q04837 148 aaKnown RBP16.48■□□□□ 0.23
SEC13-217ENST00000482647 VAX1Q5SQQ9 334 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 NDUFA11Q86Y39 141 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 OSR1Q8TAX0 266 aaPredicted RBP16.48■□□□□ 0.23
SEC13-217ENST00000482647 TCTEX1D2Q8WW35 142 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 CITED2Q99967 270 aaPredicted RBP16.48■□□□□ 0.23
SEC13-217ENST00000482647 ZNF580Q9UK33 172 aa16.48■□□□□ 0.23
SEC13-217ENST00000482647 PKD1L1Q8TDX9 2849 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 TCRBV4S1A1TA0A5B7 111 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 FCN1O00602 326 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 SLC25A17O43808 307 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 OPN1MWP04001 364 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 OPN1MW2P0DN77 364 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 OPN1MW3P0DN78 364 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 VDAC1P21796 283 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 GNRHRP30968 328 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 S100A5P33763 92 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 HIST2H2BDQ6DRA6 164 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 C10orf99Q6UWK7 81 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 ZNF818PQ6ZRF7 136 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 COMMD1Q8N668 190 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 CLCC1Q96S66 551 aa16.47■□□□□ 0.23
SEC13-217ENST00000482647 M0QYG6 137 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 TNFSF12O43508 249 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 IGLV2-23P01705 113 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 CSF1P09603 554 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 KIR2DS2P43631 304 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 TAS2R19P59542 299 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 CX3CL1P78423 397 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 NSUN5P1Q3KNT7 163 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 RNASE10Q5GAN6 216 aaKnown RBP16.46■□□□□ 0.23
SEC13-217ENST00000482647 OR2B11Q5JQS5 317 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 TCTEX1D4Q5JR98 221 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 PPP1R27Q86WC6 154 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 TMEM229BQ8NBD8 167 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 OR4S2Q8NH73 311 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 SMIM4Q8WVI0 70 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 SOSTQ9BQB4 213 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 PARP11Q9NR21 331 aa16.46■□□□□ 0.23
SEC13-217ENST00000482647 DPPA5A6NC42 116 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 SRRM4A7MD48 611 aaKnown RBP16.45■□□□□ 0.22
SEC13-217ENST00000482647 CD3DP04234 171 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 UBE2KP61086 200 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 CATR1Q13166 79 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 VMA21Q3ZAQ7 101 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 LPCAT3Q6P1A2 487 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 TEX38Q6PEX7 206 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 ZNF562Q6V9R5 426 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 CMTM1Q8IZ96 169 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 GPHA2Q96T91 129 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 TINAGL1Q9GZM7 467 aaPredicted RBP16.45■□□□□ 0.22
SEC13-217ENST00000482647 TSSC4Q9Y5U2 329 aaPredicted RBP16.45■□□□□ 0.22
SEC13-217ENST00000482647 VWFP04275 2813 aa16.45■□□□□ 0.22
SEC13-217ENST00000482647 ATP6V0E1O15342 81 aa16.44■□□□□ 0.22
SEC13-217ENST00000482647 CA2P00918 260 aa16.44■□□□□ 0.22
SEC13-217ENST00000482647 CRYGBP07316 175 aa16.44■□□□□ 0.22
SEC13-217ENST00000482647 ARRDC1Q8N5I2 433 aa16.44■□□□□ 0.22
SEC13-217ENST00000482647 TEX45Q8NA69 505 aa16.44■□□□□ 0.22
SEC13-217ENST00000482647 GSTZ1O43708 216 aaPredicted RBP16.43■□□□□ 0.22
SEC13-217ENST00000482647 CD74P04233 296 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 AADACL3Q5VUY0 350 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 STEAP1BQ6NZ63 245 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 TREML4Q6UXN2 200 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 SPAG16Q8N0X2 631 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 POC5Q8NA72 575 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 ABHD5Q8WTS1 349 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 FXYD6Q9H0Q3 95 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 TPSG1Q9NRR2 321 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 WSB1Q9Y6I7 421 aa16.43■□□□□ 0.22
SEC13-217ENST00000482647 MGAM2Q2M2H8 2515 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 TRAV41A0A0B4J266 112 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 GPR31O00270 319 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 PGLYRP1O75594 196 aaPredicted RBP16.42■□□□□ 0.22
SEC13-217ENST00000482647 CNIH1O95406 144 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 RAB3DO95716 219 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 S100GP29377 79 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 BRWD1-AS2P59051 145 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 CFHR3Q02985 330 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 TMEM267Q0VDI3 215 aaPredicted RBP16.42■□□□□ 0.22
SEC13-217ENST00000482647 KHDC1LQ5JSQ8 128 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 SLC38A6Q8IZM9 456 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 OR4F17Q8NGA8 305 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 CD300LFQ8TDQ1 290 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 OR4F4Q96R69 305 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 ZFP57Q9NU63 452 aa16.42■□□□□ 0.22
SEC13-217ENST00000482647 A0A1W2PRX2 142 aa16.41■□□□□ 0.22
SEC13-217ENST00000482647 ADARB2-AS1A8MUL3 147 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms