RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CARHSP1Q9Y2V2 147 aaKnown RBP6.43□□□□□ -1.38
SNX13-208ENST00000482558 USP34Q70CQ2 3546 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 CACNA1GO43497 2377 aa6.43□□□□□ -1.38
SNX13-208ENST00000482558 FREM1Q5H8C1 2179 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 CACNA1HO95180 2353 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 PPIAL4DF5H284 164 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 J3QR06 171 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 TIMM8AO60220 97 aaPredicted RBP6.42□□□□□ -1.38
SNX13-208ENST00000482558 PITX3O75364 302 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 MED6O75586 246 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 LYZL6O75951 148 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 HAND1O96004 215 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 APOC3P02656 99 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 CFHR2P36980 270 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 ARHGDIBP52566 201 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 TAS2R30P59541 319 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 SELENOVP59797 346 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 RAB2AP61019 212 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 ZNF154Q13106 437 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 HERPUD1Q15011 391 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 PEA15Q15121 130 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 TSC22D1Q15714 1073 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 NMSQ5H8A3 153 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 TIMM23BQ5SRD1 257 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 PXDC1Q5TGL8 231 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 Q6ZS92 163 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 STX12Q86Y82 276 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 FOXRED2Q8IWF2 684 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 WDR31Q8NA23 367 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 C9orf106Q8NAJ2 232 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 LHFPL5Q8TAF8 219 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 NEU4Q8WWR8 484 aaPredicted RBP6.42□□□□□ -1.38
SNX13-208ENST00000482558 RDH5Q92781 318 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 GALMQ96C23 342 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 NARS2Q96I59 477 aaKnown RBP6.42□□□□□ -1.38
SNX13-208ENST00000482558 LURAP1Q96LR2 239 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 TSNAXQ99598 290 aaKnown RBP6.42□□□□□ -1.38
SNX13-208ENST00000482558 PBDC1Q9BVG4 233 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 SFXN3Q9BWM7 321 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 HIPK2Q9H2X6 1198 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 ZNF71Q9NQZ8 489 aaPredicted RBP6.42□□□□□ -1.38
SNX13-208ENST00000482558 COA4Q9NYJ1 87 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 ZNF581Q9P0T4 197 aa6.42□□□□□ -1.38
SNX13-208ENST00000482558 OTOGLQ3ZCN5 2332 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 TRAV26-1A0A087WT03 109 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 IGKV1-6A0A0C4DH72 117 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 A0A1B0GW64 132 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 GAGE12BA1L429 117 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 NKX2-6A6NCS4 301 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 GAGE12HA6NDE8 117 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 PRSS46E5RG02 174 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 TOR1AO14656 332 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 CDIPTO14735 213 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 CGAP01215 116 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 NOVA1P51513 510 aaKnown RBP6.41□□□□□ -1.38
SNX13-208ENST00000482558 DVL1P1P54792 670 aaPredicted RBP6.41□□□□□ -1.38
SNX13-208ENST00000482558 GAGE2BQ13066 116 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 CATR1Q13166 79 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 UBE2V1Q13404 147 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 GAGE2EQ4V326 116 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 MIDNQ504T8 468 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 GAGE2AQ6NT46 116 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 Q6ZPA2 131 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 DMBX1Q8NFW5 382 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 OR11L1Q8NGX0 322 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 CD300LFQ8TDQ1 290 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 ERGIC1Q969X5 290 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 STARD4Q96DR4 205 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 MUCL1Q96DR8 90 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 CHRDL1Q9BU40 450 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 NKX6-2Q9C056 277 aaPredicted RBP6.41□□□□□ -1.38
SNX13-208ENST00000482558 C11orf1Q9H5F2 150 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 CCL28Q9NRJ3 127 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 UQCC1Q9NVA1 299 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 GAR1Q9NY12 217 aaKnown RBP6.41□□□□□ -1.38
SNX13-208ENST00000482558 CISD1Q9NZ45 108 aaKnown RBP6.41□□□□□ -1.38
SNX13-208ENST00000482558 GAGE2DQ9UEU5 116 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 ERRFI1Q9UJM3 462 aaPredicted RBP6.41□□□□□ -1.38
SNX13-208ENST00000482558 RCL1Q9Y2P8 373 aaKnown RBP6.41□□□□□ -1.38
SNX13-208ENST00000482558 RBM7Q9Y580 266 aaKnown RBP6.41□□□□□ -1.38
SNX13-208ENST00000482558 MMP24Q9Y5R2 645 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 WSB1Q9Y6I7 421 aa6.41□□□□□ -1.38
SNX13-208ENST00000482558 MED12LQ86YW9 2145 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 SHANK1Q9Y566 2161 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 IGHV2OR16-5A0A0B4J2B6 119 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 F8W036 122 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 MKRN2OSH3BPM6 223 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 SIRPB1O00241 398 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 HSD17B6O14756 317 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 SPINT2O43291 252 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 TNFSF13O75888 250 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 CRYAAP02489 173 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 CECR9P0C854 216 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 STAG3L2P0CL84 134 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 GZMHP20718 246 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 BMP5P22003 454 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 IL2RGP31785 369 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 GLRXP35754 106 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 HBG1P69891 147 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 HBG2P69892 147 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms