RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 LFNGQ8NES3 379 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 ARPC1AQ92747 370 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 SLC25A46Q96AG3 418 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 UBE2E2Q96LR5 201 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 GNB4Q9HAV0 340 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 VSIG4Q9Y279 399 aa12.91□□□□□ -0.34
VAMP4-204ENST00000482519 PRKDCP78527 4128 aaKnown RBP12.9□□□□□ -0.34
VAMP4-204ENST00000482519 XRCC3O43542 346 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 SOX15O60248 233 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 IGLV2-23P01705 113 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 HLA-DQB1P01920 261 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 FCGR2CP31995 323 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 TMEM69Q5SWH9 247 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 HOGA1Q86XE5 327 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 ZNF491Q8N8L2 437 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 OR11H1Q8NG94 326 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 OR13F1Q8NGS4 319 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 MRAPQ8TCY5 172 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 DPF1Q92782 380 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 MS4A10Q96PG2 267 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
VAMP4-204ENST00000482519 IFT46Q9NQC8 304 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 AURKAIP1Q9NWT8 199 aaPredicted RBP12.9□□□□□ -0.34
VAMP4-204ENST00000482519 COMMD3Q9UBI1 195 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 NUBP2Q9Y5Y2 271 aa12.9□□□□□ -0.34
VAMP4-204ENST00000482519 SRRM4A7MD48 611 aaKnown RBP12.89□□□□□ -0.35
VAMP4-204ENST00000482519 ARPC1BO15143 372 aaKnown RBP12.89□□□□□ -0.35
VAMP4-204ENST00000482519 FCGR3BO75015 233 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 CD40LGP29965 261 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 KIAA0141Q14154 515 aaPredicted RBP12.89□□□□□ -0.35
VAMP4-204ENST00000482519 AKIRIN2Q53H80 203 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 TMEM177Q53S58 311 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 C19orf54Q5BKX5 351 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 IDO2Q6ZQW0 420 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 KCTD9Q7L273 389 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 TCTEX1D1Q8N7M0 179 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 OR1N2Q8NGR9 330 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 MYOZ3Q8TDC0 251 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 DDB2Q92466 427 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 ZNF355PQ9NSJ1 428 aa12.89□□□□□ -0.35
VAMP4-204ENST00000482519 RBMX2Q9Y388 322 aaKnown RBP12.89□□□□□ -0.35
VAMP4-204ENST00000482519 SLC22A5O76082 557 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 SMIM18P0DKX4 95 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 AADACP22760 399 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 CBX5P45973 191 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 CRIP2P52943 208 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-204ENST00000482519 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 VMA21Q3ZAQ7 101 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 OR5T1Q8NG75 326 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 OR5M8Q8NGP6 311 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 SECTM1Q8WVN6 248 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 TCTEX1D2Q8WW35 142 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 GPR61Q9BZJ8 451 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 ALX4Q9H161 411 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-204ENST00000482519 TAS2R8Q9NYW2 309 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 PRELID3BQ9Y3B1 194 aa12.88□□□□□ -0.35
VAMP4-204ENST00000482519 TNFSF12O43508 249 aa12.87□□□□□ -0.35
VAMP4-204ENST00000482519 IGLV2-14P01704 120 aa12.87□□□□□ -0.35
VAMP4-204ENST00000482519 EIF4EP06730 217 aaKnown RBP12.87□□□□□ -0.35
VAMP4-204ENST00000482519 CRYGBP07316 175 aa12.87□□□□□ -0.35
VAMP4-204ENST00000482519 TPPP2P59282 170 aa12.87□□□□□ -0.35
VAMP4-204ENST00000482519 TAS2R20P59543 309 aa12.87□□□□□ -0.35
VAMP4-204ENST00000482519 RPL30P62888 115 aaKnown RBP12.87□□□□□ -0.35
VAMP4-204ENST00000482519 SNAPC3Q92966 411 aa12.87□□□□□ -0.35
VAMP4-204ENST00000482519 KCTD12Q96CX2 325 aaKnown RBP12.87□□□□□ -0.35
VAMP4-204ENST00000482519 GPHA2Q96T91 129 aa12.87□□□□□ -0.35
VAMP4-204ENST00000482519 PHB2Q99623 299 aa12.87□□□□□ -0.35
VAMP4-204ENST00000482519 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
VAMP4-204ENST00000482519 MRPS7Q9Y2R9 242 aaKnown RBP12.87□□□□□ -0.35
VAMP4-204ENST00000482519 SMIM31A0A1B0GVY4 71 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 I3L521 148 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 APELAP0DMC3 54 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 RORCP51449 518 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 FXYD4P59646 89 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 UBE2KP61086 200 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 GPR107Q5VW38 600 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 PYHIN1Q6K0P9 492 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 OR5AP2Q8NGF4 316 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 OSR1Q8TAX0 266 aaPredicted RBP12.86□□□□□ -0.35
VAMP4-204ENST00000482519 ACOT12Q8WYK0 555 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 HSD17B10Q99714 261 aaKnown RBP12.86□□□□□ -0.35
VAMP4-204ENST00000482519 CCL28Q9NRJ3 127 aa12.86□□□□□ -0.35
VAMP4-204ENST00000482519 PPYP01298 95 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 TRGV3P03979 118 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 OR8U8P0C7N1 319 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 PRSS3P35030 304 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 SSBP2P81877 361 aaPredicted RBP12.85□□□□□ -0.35
VAMP4-204ENST00000482519 ZNF616Q08AN1 781 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 CDK10Q15131 360 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 TNXAQ16473 311 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 PRSS8Q16651 343 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 VKORC1L1Q8N0U8 176 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 MFSD4AQ8N468 514 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 TEX45Q8NA69 505 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 MRPS26Q9BYN8 205 aaKnown RBP12.85□□□□□ -0.35
VAMP4-204ENST00000482519 SLC5A7Q9GZV3 580 aa12.85□□□□□ -0.35
VAMP4-204ENST00000482519 MSGN1A6NI15 193 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 SEC14L6B5MCN3 397 aa12.84□□□□□ -0.35
VAMP4-204ENST00000482519 MPPED1O15442 326 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms