RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 IL20Q9NYY1 176 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 XCL2Q9UBD3 114 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 CAB39Q9Y376 341 aaPredicted RBP3.61□□□□□ -1.83
UPF3A-205ENST00000479712 IGLV1-36A0A0B4J1U3 117 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 IGKV1D-43A0A0B4J1Z2 117 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF816-ZNF321PA0A0X1KG74 233 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 OR6C6A6NF89 314 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 KRTAP4-16G5E9R7 235 aaPredicted RBP3.6□□□□□ -1.83
UPF3A-205ENST00000479712 TNFRSF11BO00300 401 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 BHLHE40O14503 412 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 RAB29O14966 203 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 SGCEO43556 437 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 CCNB2O95067 398 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 TSPAN13O95857 204 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 CTLA4P16410 223 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF32P17041 273 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 STOMP27105 288 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 OTX1P32242 354 aaPredicted RBP3.6□□□□□ -1.83
UPF3A-205ENST00000479712 GDI2P50395 445 aaKnown RBP3.6□□□□□ -1.83
UPF3A-205ENST00000479712 BLVRAP53004 296 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 TMEM33P57088 247 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 KLF3P57682 345 aaPredicted RBP3.6□□□□□ -1.83
UPF3A-205ENST00000479712 PSG4Q00888 419 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 GLO1Q04760 184 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 FMODQ06828 376 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 ECH1Q13011 328 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 SGCAQ16586 387 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 TEX30Q5JUR7 227 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 OR52L1Q8NGH7 329 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 OR1S2Q8NGQ3 325 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 OR1N2Q8NGR9 330 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 SYNPRQ8TBG9 265 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 DNAJC9Q8WXX5 260 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 ITFG2Q969R8 447 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 NRBF2Q96F24 287 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 MRPL37Q9BZE1 423 aaKnown RBP3.6□□□□□ -1.83
UPF3A-205ENST00000479712 HDHD2Q9H0R4 259 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 SYT4Q9H2B2 425 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 REEP1Q9H902 201 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 DYNLRB1Q9NP97 96 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF256Q9Y2P7 627 aaPredicted RBP3.6□□□□□ -1.83
UPF3A-205ENST00000479712 SIGLEC9Q9Y336 463 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 IER3IP1Q9Y5U9 82 aa3.6□□□□□ -1.83
UPF3A-205ENST00000479712 SERTM2A0A1B0GWG4 89 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 TCRBV3S1A0A5B6 114 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 DHRS12A0PJE2 317 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 KLLNB2CW77 178 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 WRBO00258 174 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 GYG2O15488 501 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 SLC16A7O60669 478 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 FSTL3O95633 263 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 ANXA8P13928 327 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 NAA10P41227 235 aaPredicted RBP3.59□□□□□ -1.83
UPF3A-205ENST00000479712 SLC35A2P78381 396 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF92Q03936 586 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 DAZ2Q13117 558 aaKnown RBP3.59□□□□□ -1.83
UPF3A-205ENST00000479712 MRPL23Q16540 153 aaKnown RBP3.59□□□□□ -1.83
UPF3A-205ENST00000479712 LRRC10Q5BKY1 277 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 LCN12Q6JVE5 192 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 FBXW12Q6X9E4 464 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 C11orf53Q8IXP5 236 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 OR6V1Q8N148 313 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 LRRC18Q8N456 261 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 SUMF2Q8NBJ7 301 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 WFDC9Q8NEX5 89 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 SLC26A10Q8NG04 563 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 OR2T4Q8NH00 348 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 RDH5Q92781 318 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 SGK3Q96BR1 496 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 DUS3LQ96G46 650 aaKnown RBP3.59□□□□□ -1.83
UPF3A-205ENST00000479712 ERMAPQ96PL5 475 aaPredicted RBP3.59□□□□□ -1.83
UPF3A-205ENST00000479712 SLC29A1Q99808 456 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 THTPAQ9BU02 230 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 OSBPL10Q9BXB5 764 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 FGF20Q9NP95 211 aaPredicted RBP3.59□□□□□ -1.83
UPF3A-205ENST00000479712 DAZ3Q9NR90 486 aaKnown RBP3.59□□□□□ -1.83
UPF3A-205ENST00000479712 MMP26Q9NRE1 261 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 CMC2Q9NRP2 79 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 POMPQ9Y244 141 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 SAMHD1Q9Y3Z3 626 aaKnown RBP3.59□□□□□ -1.83
UPF3A-205ENST00000479712 V9GYQ6 96 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 FAT1Q14517 4588 aa3.59□□□□□ -1.83
UPF3A-205ENST00000479712 KIAA2026Q5HYC2 2103 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 C5orf49A4QMS7 147 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 RIIAD1A6NNX1 92 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 H7C1C5 153 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 FKBP6O75344 327 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 RP2O75695 350 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 EIF3GO75821 320 aaKnown RBP eCLIP3.58□□□□□ -1.84
UPF3A-205ENST00000479712 MOSP00540 346 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 INSP01308 110 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 IFNGP01579 166 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 APOC1P02654 83 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 HMGN1P05114 100 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 ADRA2AP08913 450 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 HIST1H1CP16403 213 aaKnown RBP3.58□□□□□ -1.84
UPF3A-205ENST00000479712 GGT2P36268 569 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 CTRLP40313 264 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 PPP1CBP62140 327 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms