RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 LINC00205P59089 165 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 FOXE3Q13461 319 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 VAX1Q5SQQ9 334 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 SNX29P2Q8IUI4 249 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 TEX45Q8NA69 505 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 OR4F17Q8NGA8 305 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 OR6F1Q8NGZ6 308 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 MOB3AQ96BX8 217 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 NOL4LQ96MY1 436 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-217ENST00000479161 OR4F4Q96R69 305 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 ABHD1Q96SE0 405 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 EHFQ9NZC4 300 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 CMYA5Q8N3K9 4069 aa12.17□□□□□ -0.46
C9orf3-217ENST00000479161 MEIS3P1A6NDR6 274 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 GABARAPH6UMI1 98 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 VDAC1P21796 283 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 PPIFP30405 207 aaKnown RBP12.16□□□□□ -0.46
C9orf3-217ENST00000479161 KIR2DS2P43631 304 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 RFX2P48378 723 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 UBE2KP61086 200 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 CX3CL1P78423 397 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 AKIRIN2Q53H80 203 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 PYHIN1Q6K0P9 492 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 LPCAT3Q6P1A2 487 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 KCTD9Q7L273 389 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 PPP1R27Q86WC6 154 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 LAX1Q8IWV1 398 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 MFSD4AQ8N468 514 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 BVESQ8NE79 360 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 FCAMRQ8WWV6 532 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 AIFM2Q9BRQ8 373 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 FBXL15Q9H469 300 aa12.16□□□□□ -0.46
C9orf3-217ENST00000479161 METTL1Q9UBP6 276 aaKnown RBP12.16□□□□□ -0.46
C9orf3-217ENST00000479161 RSL24D1Q9UHA3 163 aaKnown RBP12.16□□□□□ -0.46
C9orf3-217ENST00000479161 NOTCH3Q9UM47 2321 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 TCRBV4S1A1TA0A5B7 111 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 SHOXO15266 292 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 HRH1P35367 487 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 UCP3P55916 312 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 HERV-K104P61576 105 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 TMEM267Q0VDI3 215 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-217ENST00000479161 C19orf54Q5BKX5 351 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 CADM3Q8N126 398 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 C11orf44Q8N8P7 122 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 MINDY2Q8NBR6 621 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 CD300LFQ8TDQ1 290 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 SECTM1Q8WVN6 248 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 TMEM68Q96MH6 324 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 SOSTQ9BQB4 213 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 SLC5A7Q9GZV3 580 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 NUBP2Q9Y5Y2 271 aa12.15□□□□□ -0.46
C9orf3-217ENST00000479161 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
C9orf3-217ENST00000479161 CREBL2O60519 120 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-217ENST00000479161 IGLV1-40P01703 118 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 FGF2P09038 288 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 PSMB8P28062 276 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 GNRHRP30968 328 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 RPL30P62888 115 aaKnown RBP12.14□□□□□ -0.47
C9orf3-217ENST00000479161 CATR1Q13166 79 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 PLGLAQ15195 96 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 VMA21Q3ZAQ7 101 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 ZNF329Q86UD4 541 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 ARRDC1Q8N5I2 433 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 OR52I2Q8NH67 350 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 OR4S2Q8NH73 311 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 MCFD2Q8NI22 146 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 MYOZ3Q8TDC0 251 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 DIRAS2Q96HU8 199 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 ZNF2Q9BSG1 426 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-217ENST00000479161 CCL28Q9NRJ3 127 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 FAM212BQ9NTI7 297 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-217ENST00000479161 KLK11Q9UBX7 282 aa12.14□□□□□ -0.47
C9orf3-217ENST00000479161 FCN1O00602 326 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 ATP6V0E1O15342 81 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 SLC25A17O43808 307 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 BRI3O95415 125 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 CRYZL1O95825 349 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 TSPAN15O95858 294 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 PMP2P02689 132 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 CD74P04233 296 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 HLA-DMAP28067 261 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-217ENST00000479161 BRWD1-AS2P59051 145 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 RPL23AP62750 156 aaKnown RBP12.13□□□□□ -0.47
C9orf3-217ENST00000479161 CXorf66Q5JRM2 361 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-217ENST00000479161 C10orf99Q6UWK7 81 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 TMEM17Q86X19 198 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 CMTM1Q8IZ96 169 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 TMEM229BQ8NBD8 167 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 VSTM2AQ8TAG5 236 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 SMIM4Q8WVI0 70 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 RBMXL1Q96E39 390 aaKnown RBP12.13□□□□□ -0.47
C9orf3-217ENST00000479161 TAS2R8Q9NYW2 309 aa12.13□□□□□ -0.47
C9orf3-217ENST00000479161 NOTCH1P46531 2555 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 TRAV41A0A0B4J266 112 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 J3QRK9 145 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 GSTZ1O43708 216 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-217ENST00000479161 FCGR3BO75015 233 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 HRASP01112 189 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms