RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 PLEKHA3Q9HB20 300 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 COL5A1P20908 1838 aaPredicted RBP8.24□□□□□ -1.09
CMC1-209ENST00000477739 LOC102723971A0A1B0GUV8 181 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 CEACAM18A8MTB9 384 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 GPR12P47775 334 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 GFRA1P56159 465 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 OR5I1Q13606 314 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 TBC1D28Q2M2D7 210 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 MRPL54Q6P161 138 aaKnown RBP8.24□□□□□ -1.09
CMC1-209ENST00000477739 TMEM256Q8N2U0 113 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 FAM216AQ8WUB2 273 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 BTF3L4Q96K17 158 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 RTL8AQ9BWD3 113 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 LIN7CQ9NUP9 197 aaKnown RBP8.24□□□□□ -1.09
CMC1-209ENST00000477739 KLF13Q9Y2Y9 288 aaPredicted RBP8.24□□□□□ -1.09
CMC1-209ENST00000477739 PPIAL4AQ9Y536 164 aa8.24□□□□□ -1.09
CMC1-209ENST00000477739 MDFIC2A0A1B0GVS7 189 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 RRP8O43159 456 aaKnown RBP8.23□□□□□ -1.09
CMC1-209ENST00000477739 IGKV1-39P01597 117 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 HBZP02008 142 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 IGKV1D-39P04432 117 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 GCH1P30793 250 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 ARR3P36575 388 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 MPV17P39210 176 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 TECTBQ96PL2 329 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 VAX2Q9UIW0 290 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 ODAMA1E959 279 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 FOXI3A8MTJ6 420 aaPredicted RBP8.23□□□□□ -1.09
CMC1-209ENST00000477739 HAND1O96004 215 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 OR4A8P0C604 315 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 LYL1P12980 280 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 KITLGP21583 273 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 UCP1P25874 307 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 CDC34P49427 236 aaPredicted RBP8.23□□□□□ -1.09
CMC1-209ENST00000477739 LHX2P50458 406 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 MRPL49Q13405 166 aaKnown RBP8.23□□□□□ -1.09
CMC1-209ENST00000477739 MSMO1Q15800 293 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 HIST3H2BBQ8N257 126 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 ZNF525Q8N782 197 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 VN1R17PQ8TDU5 208 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 NANOS1Q8WY41 292 aaKnown RBP8.23□□□□□ -1.09
CMC1-209ENST00000477739 RAB40CQ96S21 281 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 SOX8P57073 446 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 OR8B8Q15620 311 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 NMSQ5H8A3 153 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 DPPA3Q6W0C5 159 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 OR2T10Q8NGZ9 312 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 ACY3Q96HD9 319 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 PRDM14Q9GZV8 571 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 ENY2Q9NPA8 101 aa8.23□□□□□ -1.09
CMC1-209ENST00000477739 EXPH5Q8NEV8 1989 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 H0Y980 276 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 IGHV2-70P01814 119 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 IGHV2-5P01817 119 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 TDGF1P13385 188 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 IER3P46695 156 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 CLDN18P56856 261 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 HTD2P86397 168 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 ID3Q02535 119 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 GTF3AQ92664 365 aaKnown RBP8.22□□□□□ -1.09
CMC1-209ENST00000477739 C14orf144Q96I85 54 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 MS4A10Q96PG2 267 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 REPIN1Q9BWE0 567 aaKnown RBP8.22□□□□□ -1.09
CMC1-209ENST00000477739 C1QTNF5Q9BXJ0 243 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 SETD2Q9BYW2 2564 aaPredicted RBP8.22□□□□□ -1.09
CMC1-209ENST00000477739 MALRD1Q5VYJ5 2156 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 PTBP3O95758 552 aaKnown RBP8.22□□□□□ -1.09
CMC1-209ENST00000477739 COX5AP20674 150 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 FAM90A2PQ658T7 463 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 HAPLN4Q86UW8 402 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 LYG1Q8N1E2 194 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 OR5A2Q8NGI9 324 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 DDA1Q9BW61 102 aa8.22□□□□□ -1.09
CMC1-209ENST00000477739 QTRT1Q9BXR0 403 aaKnown RBP8.22□□□□□ -1.09
CMC1-209ENST00000477739 ACTR3CQ9C0K3 210 aaPredicted RBP8.22□□□□□ -1.09
CMC1-209ENST00000477739 TRGV5A0A0B4J1U4 118 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 C12orf77C9JDV5 145 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 CYB5R3P00387 301 aaPredicted RBP8.21□□□□□ -1.09
CMC1-209ENST00000477739 CA1P00915 261 aaPredicted RBP8.21□□□□□ -1.09
CMC1-209ENST00000477739 SP1P08047 785 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 GZMHP20718 246 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 TFPI2P48307 235 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 ERVFC1-1P60608 527 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 CATR1Q13166 79 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 LRRC29Q8WV35 223 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 RYDENQ9NUL5 291 aaKnown RBP8.21□□□□□ -1.09
CMC1-209ENST00000477739 ZZEF1O43149 2961 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 CACNA1AO00555 2505 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 LOC102724200A0A096LPH7 203 aaPredicted RBP8.21□□□□□ -1.09
CMC1-209ENST00000477739 C19orf67A6NJJ6 358 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 C21orf140B9A014 251 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 F6UZH7 168 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 M0R296 226 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.09
CMC1-209ENST00000477739 ERVK-16P61578 105 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 ZNF506Q5JVG8 444 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 TMEM42Q69YG0 159 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 MOB3BQ86TA1 216 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 OR4P4Q8NGL7 312 aa8.21□□□□□ -1.09
CMC1-209ENST00000477739 TPPP3Q9BW30 176 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms