RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TMEM252Q8N6L7 170 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 OR5P3Q8WZ94 311 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 TSSK2Q96PF2 358 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 RBM24Q9BX46 236 aaKnown RBP10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 ULBP2Q9BZM5 246 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 STRADBQ9C0K7 418 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 ARRDC1-AS1Q9H2J1 176 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 FAM206AQ9NX38 181 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 MUC3AQ02505 3323 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 TRAV36DV7A0A075B6V5 113 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 A0A1W2PS18 150 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 FAM24AA6NFZ4 105 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 H3BRM9 83 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 SIVA1O15304 175 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 ASAH2BP0C7U1 165 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 IL11P20809 199 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 SRD5A2P31213 254 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 REG1BP48304 166 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 SUMO3P55854 103 aaPredicted RBP10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 MRPS34P82930 218 aaKnown RBP10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 EGR4Q05215 589 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 TMEM187Q14656 261 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 EMC4Q5J8M3 183 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 OR10X1Q8NGY0 326 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 NEUROG1Q92886 237 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 MBD6Q96DN6 1003 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 C18orf12Q96KH6 178 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 RTN4RQ9BZR6 473 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 COMMD5Q9GZQ3 224 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 TEX48A0A1B0GUV7 120 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 TMPRSS2O15393 492 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 CNIH1O95406 144 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 CLDN1O95832 211 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 MT-ATP6P00846 226 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 HIST1H1DP16402 221 aaKnown RBP10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 DNASE1L1P49184 302 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 PSMB3P49720 205 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 GABRA6Q16445 453 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 SPATA46Q5T0L3 261 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 OR2M3Q8NG83 312 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 MRPL30Q8TCC3 161 aaKnown RBP10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 DEFB126Q9BYW3 111 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 RPRMQ9NS64 109 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 B3GALT1Q9Y5Z6 326 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 VPS13AQ96RL7 3174 aa10.73□□□□□ -0.69
RTFDC1-207ENST00000477573 TMED7-TICAM2A0A0A6YYA0 188 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 A6NDN8 102 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 CELA3BP08861 270 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 F2RP25116 425 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 DYNLT3P51808 116 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 ZNF133P52736 654 aaPredicted RBP10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 FBXW4P57775 412 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 CTXN1P60606 82 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 SERF2P84101 59 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 ZNF585BQ52M93 769 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 TCF23Q7RTU1 214 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 PLPPR1Q8TBJ4 325 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 ST8SIA1Q92185 356 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 C8orf44Q96CB5 159 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 GNB4Q9HAV0 340 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 KIF26BQ2KJY2 2108 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 TMEM14DPA8MWL7 114 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 H3BSH0 61 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 PLPP3O14495 311 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 MT-ND6P03923 174 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 VSIG8P0DPA2 414 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 CCL4P13236 92 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 TBR1Q16650 682 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 SCCPDHQ8NBX0 429 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 OR52E5Q8NH55 327 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 FNDC4Q9H6D8 234 aaPredicted RBP10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 KLHL13Q9P2N7 655 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 ZNF391Q9UJN7 358 aa10.72□□□□□ -0.69
RTFDC1-207ENST00000477573 LOC102723996A0A087X1L8 192 aa10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 FBLL1A6NHQ2 334 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 RPL24P83731 157 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 RELBQ01201 579 aa10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 SRSF6Q13247 344 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 KIAA1644Q3SXP7 199 aa10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 C1orf140Q5VVS0 124 aa10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 C16orf47Q6ZP98 133 aaPredicted RBP10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 LSRQ86X29 649 aaPredicted RBP10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 RTN4IP1Q8WWV3 396 aaPredicted RBP10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 CLEC7AQ9BXN2 247 aa10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 WDR61Q9GZS3 305 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 NAA60Q9H7X0 242 aa10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 IL36GQ9NZH8 169 aa10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 KLRF1Q9NZS2 232 aa10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 TAAR3PQ9P1P4 343 aa10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 PTRH2Q9Y3E5 179 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-207ENST00000477573 SPEGQ15772 3267 aa10.71□□□□□ -0.7
RTFDC1-207ENST00000477573 SLC33A1O00400 549 aaPredicted RBP10.7□□□□□ -0.7
RTFDC1-207ENST00000477573 BGLAPP02818 100 aa10.7□□□□□ -0.7
RTFDC1-207ENST00000477573 ADH4P08319 380 aa10.7□□□□□ -0.7
RTFDC1-207ENST00000477573 PMCHP20382 165 aa10.7□□□□□ -0.7
RTFDC1-207ENST00000477573 RPL18Q07020 188 aaKnown RBP10.7□□□□□ -0.7
RTFDC1-207ENST00000477573 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
RTFDC1-207ENST00000477573 DCAF12Q5T6F0 453 aa10.7□□□□□ -0.7
RTFDC1-207ENST00000477573 FAM69BQ5VUD6 431 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms