RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 RRHO14718 337 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 CD28P10747 220 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 AP3S2P59780 193 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 FOXE3Q13461 319 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 ZNF846Q147U1 533 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 RTL8BQ17RB0 113 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 TMEM95Q3KNT9 176 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 C9orf152Q5JTZ5 239 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 DHRS11Q6UWP2 260 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 ARRDC1Q8N5I2 433 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 TCTEX1D1Q8N7M0 179 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 OR5H2Q8NGV7 314 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 HSD17B10Q99714 261 aaKnown RBP9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 CITED2Q99967 270 aaPredicted RBP9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 RNF150Q9ULK6 438 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 RBM7Q9Y580 266 aaKnown RBP9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 VWFP04275 2813 aa9.75□□□□□ -0.85
CLCNKA-205ENST00000477360 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 IGHG4P01861 327 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 CD3DP04234 171 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 ELANEP08246 267 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 AKAIN1P0CW23 69 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 HLA-DMAP28067 261 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 DUTP33316 252 aaKnown RBP9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 HRH1P35367 487 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 CFHR3Q02985 330 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 MEF2DQ14814 521 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 BAK1Q16611 211 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 RNASE12Q5GAN4 147 aaKnown RBP9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 RNASE10Q5GAN6 216 aaKnown RBP9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 TCTEX1D4Q5JR98 221 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 STEAP1BQ6NZ63 245 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 ZNF562Q6V9R5 426 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 OSR1Q8TAX0 266 aaPredicted RBP9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 DDB2Q92466 427 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 OR51J1Q9H342 316 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 SLC35D1Q9NTN3 355 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 EHFQ9NZC4 300 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 PRELID3BQ9Y3B1 194 aa9.74□□□□□ -0.85
CLCNKA-205ENST00000477360 TCRBV4S1A1TA0A5B7 111 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 RAB3DO95716 219 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 IGKV1-16P04430 117 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 IL7P13232 177 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 VDAC1P21796 283 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 RFX2P48378 723 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 KLF9Q13886 244 aaPredicted RBP9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 ZNF66Q6ZN08 573 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 TOMM5Q8N4H5 51 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 WFDC9Q8NEX5 89 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 RITA1Q96K30 269 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 TMEM68Q96MH6 324 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 AIFM2Q9BRQ8 373 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 SLC2A8Q9NY64 477 aa9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 TET2Q6N021 2002 aaPredicted RBP9.73□□□□□ -0.85
CLCNKA-205ENST00000477360 IGHV7-81A0A0B4J1V7 117 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 SH2D7A6NKC9 451 aaPredicted RBP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 RBFOX2O43251 390 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 CREBL2O60519 120 aaPredicted RBP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 BRI3O95415 125 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 TSPAN15O95858 294 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 PPYP01298 95 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 PMP2P02689 132 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 ZNF735P0CB33 412 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 NFYAP23511 347 aaPredicted RBP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 PPIFP30405 207 aaKnown RBP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 FCGR2CP31995 323 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 FAUP35544 74 aaKnown RBP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 KIR2DS2P43631 304 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 TMEM267Q0VDI3 215 aaPredicted RBP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 EIF4EBP1Q13541 118 aaPredicted RBP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 PSG5Q15238 335 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 AKIRIN2Q53H80 203 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 TRIQKQ629K1 86 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 LHFPL1Q86WI0 220 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 TMEM17Q86X19 198 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 DRAXINQ8NBI3 349 aaPredicted RBP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 MINDY2Q8NBR6 621 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 OR4C16Q8NGL9 310 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 OR6F1Q8NGZ6 308 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 MOB3AQ96BX8 217 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 HSPB9Q9BQS6 159 aa9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 C7orf50Q9BRJ6 194 aaKnown RBP9.72□□□□□ -0.85
CLCNKA-205ENST00000477360 NAP1L6A6NFF2 107 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 IGLV1-40P01703 118 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 IGLV2-14P01704 120 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 FCER2P06734 321 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 CRYGBP07316 175 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 FGF2P09038 288 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 PSMB8P28062 276 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 CDX1P47902 265 aaPredicted RBP9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 UCP3P55916 312 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 UBE2KP61086 200 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 RPS16P62249 146 aaKnown RBP9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 RPL23AP62750 156 aaKnown RBP9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 CX3CL1P78423 397 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 C19orf54Q5BKX5 351 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 CXorf66Q5JRM2 361 aaPredicted RBP9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 GLDNQ6ZMI3 551 aaPredicted RBP9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 PPP1R27Q86WC6 154 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms