RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 TMEM108Q6UXF1 575 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 IQCF2Q8IXL9 164 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 ZCCHC24Q8N2G6 241 aaKnown RBP7.4□□□□□ -1.22
CCDC66-216ENST00000476142 FAM216BQ8N7L0 139 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 TCTEX1D1Q8N7M0 179 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 RAB39BQ96DA2 213 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 CIB3Q96Q77 187 aaPredicted RBP7.4□□□□□ -1.22
CCDC66-216ENST00000476142 YPEL2Q96QA6 119 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 S1PR3Q99500 378 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 TMEM147Q9BVK8 224 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 MAP1LC3BQ9GZQ8 125 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 APC2O95996 2303 aa7.4□□□□□ -1.22
CCDC66-216ENST00000476142 TRGV10A0A0A0MS01 117 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 LOC102723971A0A1B0GUV8 181 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 SMCO3A2RU48 225 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 PPIHO43447 177 aaKnown RBP7.4□□□□□ -1.23
CCDC66-216ENST00000476142 TAGLN2P37802 199 aaKnown RBP7.4□□□□□ -1.23
CCDC66-216ENST00000476142 RAB5BP61020 215 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 SERF2P84101 59 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 PAX5Q02548 391 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 C3orf36Q3SXR2 165 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 PRR30Q53SZ7 412 aaPredicted RBP7.4□□□□□ -1.23
CCDC66-216ENST00000476142 ZNF561Q8N587 486 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 NIPSNAP3BQ9BS92 247 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 LRFN3Q9BTN0 628 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 IFI27L2Q9H2X8 130 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 SLC25A22Q9H936 323 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 SLC39A9Q9NUM3 307 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 IL19Q9UHD0 177 aa7.4□□□□□ -1.23
CCDC66-216ENST00000476142 ZNF727A8MUV8 499 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 F2RL2O00254 374 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 OR2C1O95371 312 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 HPRT1P00492 218 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 BCL2P10415 239 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 KHDC3LQ587J8 217 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 ADAM5Q6NVV9 412 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 ZNF709Q8N972 641 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 PINX1Q96BK5 328 aaKnown RBP7.39□□□□□ -1.23
CCDC66-216ENST00000476142 ACACAQ13085 2346 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 TRAV1-1A0A0B4J248 108 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 C1orf196B1AJZ1 125 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 IFNA10P01566 189 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 MT-ND4LP03901 98 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 OR4A8P0C604 315 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 OR8U8P0C7N1 319 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 NDUFB7P17568 137 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 PTAFRP25105 342 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 GATA4P43694 442 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 DLK1P80370 383 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 BSPH1Q075Z2 132 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 C17orf58Q2M2W7 97 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 FFAR4Q5NUL3 377 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 ACSM6Q6P461 480 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 MRGPRGQ86SM5 289 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 SPACA3Q8IXA5 215 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 LYG1Q8N1E2 194 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 KDF1Q8NAX2 398 aaPredicted RBP7.39□□□□□ -1.23
CCDC66-216ENST00000476142 Q8TCH9 128 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 LHX4Q969G2 390 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 SNRNP40Q96DI7 357 aaKnown RBP7.39□□□□□ -1.23
CCDC66-216ENST00000476142 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 ATMQ13315 3056 aa7.39□□□□□ -1.23
CCDC66-216ENST00000476142 TRAV3A0A0B4J244 114 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 KBTBD11-OT1A0A1B0GTJ5 212 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 TMPRSS2O15393 492 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 IGKV1D-33P01593 117 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 IGKV1-33P01594 117 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 TDGF1P3P51864 188 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 HABP2Q14520 560 aaPredicted RBP7.38□□□□□ -1.23
CCDC66-216ENST00000476142 ATP6V1FQ16864 119 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 STUMQ69YW2 141 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 SP5Q6BEB4 398 aaPredicted RBP7.38□□□□□ -1.23
CCDC66-216ENST00000476142 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
CCDC66-216ENST00000476142 Q8NA96 180 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 TVP23CQ96ET8 276 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 GAFA1Q96PS6 74 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 HEYLQ9NQ87 328 aaPredicted RBP7.38□□□□□ -1.23
CCDC66-216ENST00000476142 GFOD1Q9NXC2 390 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 SAA2-SAA4A0A096LPE2 208 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 DPRXA6NFQ7 191 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 SAA2P0DJI9 122 aaPredicted RBP7.38□□□□□ -1.23
CCDC66-216ENST00000476142 RAB5AP20339 215 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 HOXA1P49639 335 aaPredicted RBP7.38□□□□□ -1.23
CCDC66-216ENST00000476142 CT45A1Q5HYN5 189 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 RPP25LQ8N5L8 163 aaKnown RBP7.38□□□□□ -1.23
CCDC66-216ENST00000476142 OR10G4Q8NGN3 311 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 OR10G9Q8NGN4 311 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 OR10G7Q8NGN6 311 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 CT45A3Q8NHU0 189 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 MBD3L1Q8WWY6 194 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 PARD6GQ9BYG4 376 aaPredicted RBP7.38□□□□□ -1.23
CCDC66-216ENST00000476142 TMPRSS5Q9H3S3 457 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 TMEM140Q9NV12 185 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 URGCP-MRPS24S4R325 110 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 PLCE1Q9P212 2302 aa7.38□□□□□ -1.23
CCDC66-216ENST00000476142 PMS2P5A8MQ11 134 aa7.37□□□□□ -1.23
CCDC66-216ENST00000476142 IFNA1P01562 189 aa7.37□□□□□ -1.23
CCDC66-216ENST00000476142 DEFA4P12838 97 aa7.37□□□□□ -1.23
CCDC66-216ENST00000476142 NQO2P16083 231 aa7.37□□□□□ -1.23
CCDC66-216ENST00000476142 PAX6P26367 422 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms