RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 IGHV1-69-2A0A0G2JMI3 117 aa3□□□□□ -1.93
SMC5-203ENST00000475540 H0YJX3 145 aa3□□□□□ -1.93
SMC5-203ENST00000475540 IGKV1D-12P01611 117 aa3□□□□□ -1.93
SMC5-203ENST00000475540 IGHG2P01859 326 aa3□□□□□ -1.93
SMC5-203ENST00000475540 HLA-DQB2P05538 268 aa3□□□□□ -1.93
SMC5-203ENST00000475540 HIST1H1TP22492 207 aaPredicted RBP3□□□□□ -1.93
SMC5-203ENST00000475540 TGFBR2P37173 567 aa3□□□□□ -1.93
SMC5-203ENST00000475540 AKR1C2P52895 323 aa3□□□□□ -1.93
SMC5-203ENST00000475540 HOXC5Q00444 222 aa3□□□□□ -1.93
SMC5-203ENST00000475540 CAV1Q03135 178 aa3□□□□□ -1.93
SMC5-203ENST00000475540 LPCAT3Q6P1A2 487 aa3□□□□□ -1.93
SMC5-203ENST00000475540 C3orf22Q8N5N4 141 aa3□□□□□ -1.93
SMC5-203ENST00000475540 ST20-AS1Q8NBB2 130 aa3□□□□□ -1.93
SMC5-203ENST00000475540 PPP1R2P1Q96PQ5 205 aa3□□□□□ -1.93
SMC5-203ENST00000475540 TRABDQ9H4I3 376 aa3□□□□□ -1.93
SMC5-203ENST00000475540 IDI2-AS1Q9NZ38 188 aa3□□□□□ -1.93
SMC5-203ENST00000475540 ZNF230Q9UIE0 474 aaPredicted RBP3□□□□□ -1.93
SMC5-203ENST00000475540 VPREB3Q9UKI3 123 aa3□□□□□ -1.93
SMC5-203ENST00000475540 HHLA2Q9UM44 414 aa3□□□□□ -1.93
SMC5-203ENST00000475540 FAM32AQ9Y421 112 aaKnown RBP3□□□□□ -1.93
SMC5-203ENST00000475540 PHLDA3Q9Y5J5 127 aa3□□□□□ -1.93
SMC5-203ENST00000475540 NAV1Q8NEY1 1877 aa3□□□□□ -1.93
SMC5-203ENST00000475540 DOCK8Q8NF50 2099 aa3□□□□□ -1.93
SMC5-203ENST00000475540 RPRD2Q5VT52 1461 aaKnown RBP2.99□□□□□ -1.93
SMC5-203ENST00000475540 A8MWP4 228 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 KLRC4O43908 158 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 CIAO1O76071 339 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 IGLV7-43P04211 117 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 CGB3P0DN86 165 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 CGB7P0DN87 165 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 PPP1CCP36873 323 aaKnown RBP2.99□□□□□ -1.93
SMC5-203ENST00000475540 DAPP51397 102 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 FGF12P61328 243 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 DEFA6Q01524 100 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 MEF2BQ02080 365 aaPredicted RBP2.99□□□□□ -1.93
SMC5-203ENST00000475540 BSPH1Q075Z2 132 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 APOFQ13790 326 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 IAH1Q2TAA2 248 aaPredicted RBP2.99□□□□□ -1.93
SMC5-203ENST00000475540 TEX36Q5VZQ5 186 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 TRIQKQ629K1 86 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 SMIM15Q7Z3B0 74 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 C1orf174Q8IYL3 243 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 ZNF680Q8NEM1 530 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 OR11G2Q8NGC1 345 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 OR2D3Q8NGH3 330 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 OR5P3Q8WZ94 311 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 CCL13Q99616 98 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 C1QTNF6Q9BXI9 259 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 ENY2Q9NPA8 101 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 MRPL27Q9P0M9 148 aaKnown RBP2.99□□□□□ -1.93
SMC5-203ENST00000475540 RPUSD1Q9UJJ7 312 aaKnown RBP2.99□□□□□ -1.93
SMC5-203ENST00000475540 PKIGQ9Y2B9 76 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 WRNQ14191 1432 aaPredicted RBP eCLIP2.99□□□□□ -1.93
SMC5-203ENST00000475540 ANKRD30AQ9BXX3 1397 aa2.99□□□□□ -1.93
SMC5-203ENST00000475540 TRIOBPQ9H2D6 2365 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 ADGRL1O94910 1474 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 OR4C46A6NHA9 309 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 FAM159BA6NKW6 160 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 INMT-MINDY4F8WBC2 141 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 H3BQV1 296 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 PDE6DO43924 150 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 IGKV1D-33P01593 117 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 IGKV1-33P01594 117 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 IGHMP01871 453 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 RPSAP08865 295 aaKnown RBP2.98□□□□□ -1.93
SMC5-203ENST00000475540 FGF6P10767 208 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 SNRPD2P62316 118 aaKnown RBP2.98□□□□□ -1.93
SMC5-203ENST00000475540 TBPL2Q6SJ96 375 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 OOSP2Q86WS3 158 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 OR51A2Q8NGJ7 313 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 GNPNAT1Q96EK6 184 aaPredicted RBP2.98□□□□□ -1.93
SMC5-203ENST00000475540 CNBD2Q96M20 576 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 HOPXQ9BPY8 73 aaPredicted RBP2.98□□□□□ -1.93
SMC5-203ENST00000475540 OPTCQ9UBM4 332 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 ICOSQ9Y6W8 199 aa2.98□□□□□ -1.93
SMC5-203ENST00000475540 BAZ1BQ9UIG0 1483 aaKnown RBP2.97□□□□□ -1.93
SMC5-203ENST00000475540 SCN1AP35498 2009 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 TRBV24-1A0A075B6N3 115 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 OR5K4A6NMS3 321 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 ZNF729A6NN14 1252 aaPredicted RBP2.97□□□□□ -1.93
SMC5-203ENST00000475540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.97□□□□□ -1.93
SMC5-203ENST00000475540 FAAHO00519 579 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 TRGV3P03979 118 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 CRYGDP07320 174 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 ESDP10768 282 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 TAS2R45P59539 299 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 UMODL1-AS1Q8N2C9 162 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 SLC22A24Q8N4F4 322 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 RPRMLQ8N4K4 120 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 OR2T4Q8NH00 348 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 HIST1H2BAQ96A08 127 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 C12orf43Q96C57 262 aaKnown RBP2.97□□□□□ -1.93
SMC5-203ENST00000475540 KLF6Q99612 283 aaPredicted RBP2.97□□□□□ -1.93
SMC5-203ENST00000475540 GPR84Q9NQS5 396 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 PRTFDC1Q9NRG1 225 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 RSL24D1Q9UHA3 163 aaKnown RBP2.97□□□□□ -1.93
SMC5-203ENST00000475540 AK3Q9UIJ7 227 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 ANGPT4Q9Y264 503 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 MTUS2Q5JR59 1369 aa2.97□□□□□ -1.93
SMC5-203ENST00000475540 A6NED7 52 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms