RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NECAP1Q8NC96 275 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 SRSF12Q8WXF0 261 aaKnown RBP9.47□□□□□ -0.89
SKA3-206ENST00000475251 OVOL2Q9BRP0 275 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 NICN1Q9BSH3 213 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 URM1Q9BTM9 101 aaKnown RBP9.47□□□□□ -0.89
SKA3-206ENST00000475251 AKIP1Q9NQ31 210 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 RDH8Q9NYR8 311 aa9.47□□□□□ -0.89
SKA3-206ENST00000475251 LGALS9O00182 355 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 GGCTO75223 188 aaKnown RBP9.46□□□□□ -0.9
SKA3-206ENST00000475251 ACTL6BO94805 426 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 SCTP09683 121 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 APELAP0DMC3 54 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 ATF4P18848 351 aaPredicted RBP9.46□□□□□ -0.9
SKA3-206ENST00000475251 SRMP19623 302 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 CELP19835 753 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 LINC00205P59089 165 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 TNXAQ16473 311 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 TMEM177Q53S58 311 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 SLC25A42Q86VD7 318 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 WFDC3Q8IUB2 231 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 TMEM217Q8N7C4 229 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 TEX45Q8NA69 505 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 ZNF485Q8NCK3 441 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 OR52B4Q8NGK2 314 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 PHYHIPQ92561 330 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 GGHQ92820 318 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 WDR89Q96FK6 387 aaPredicted RBP9.46□□□□□ -0.9
SKA3-206ENST00000475251 SPIN2AQ99865 258 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 SPIN2BQ9BPZ2 258 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 Q9N2K0 584 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 AK3Q9UIJ7 227 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 HSF4Q9ULV5 492 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 TP53TG1Q9Y2A0 90 aa9.46□□□□□ -0.9
SKA3-206ENST00000475251 TRBV9A0A0B4J1U6 114 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 EFCAB10A6NFE3 127 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 TMEM14DPA8MWL7 114 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 MYL12BO14950 172 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 BMI1P35226 326 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 UBE2KP61086 200 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 TNFRSF9Q07011 255 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 UNC119Q13432 240 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 PRSS8Q16651 343 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 RBM48Q5RL73 367 aaKnown RBP9.45□□□□□ -0.9
SKA3-206ENST00000475251 C1orf100Q5SVJ3 147 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 ZNF57Q68EA5 555 aaPredicted RBP9.45□□□□□ -0.9
SKA3-206ENST00000475251 ACOT12Q8WYK0 555 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 ADTRPQ96IZ2 230 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 OR2D2Q9H210 308 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 FRAS1Q86XX4 4008 aa9.45□□□□□ -0.9
SKA3-206ENST00000475251 A0A0J9YWU9 116 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 ERICH4A6NGS2 130 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 TRDCB7Z8K6 153 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 RBMXL2O75526 392 aaKnown RBP9.44□□□□□ -0.9
SKA3-206ENST00000475251 CBLN1P23435 193 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 APOC4P55056 127 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 WNT4P56705 351 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 MRPS15P82914 257 aaKnown RBP9.44□□□□□ -0.9
SKA3-206ENST00000475251 ST3GAL4Q11206 333 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 C15orf32Q32M92 178 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 OR4A47Q6IF82 309 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 Q6ZWC4 215 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 GPHB5Q86YW7 130 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 MS4A15Q8N5U1 240 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 SETD9Q8NE22 299 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 OR6M1Q8NGM8 313 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 OR4A4PQ8NGN8 299 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 CMSS1Q9BQ75 279 aaKnown RBP9.44□□□□□ -0.9
SKA3-206ENST00000475251 HDHD3Q9BSH5 251 aaPredicted RBP9.44□□□□□ -0.9
SKA3-206ENST00000475251 SDHAF2Q9NX18 166 aa9.44□□□□□ -0.9
SKA3-206ENST00000475251 SMPD3Q9NY59 655 aaPredicted RBP9.44□□□□□ -0.9
SKA3-206ENST00000475251 RANBP1P43487 201 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 QRFPP83859 136 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 FAM106AQ4KMX7 169 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 ACSM3Q53FZ2 586 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 LGALS9CQ6DKI2 356 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 LYG2Q86SG7 212 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 FAM89BQ8N5H3 189 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 RPP25LQ8N5L8 163 aaKnown RBP9.43□□□□□ -0.9
SKA3-206ENST00000475251 TTC9CQ8N5M4 171 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 OR10J5Q8NHC4 309 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 OSR1Q8TAX0 266 aaPredicted RBP9.43□□□□□ -0.9
SKA3-206ENST00000475251 LPAR5Q9H1C0 372 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 ZNF257Q9Y2Q1 563 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 RBM7Q9Y580 266 aaKnown RBP9.43□□□□□ -0.9
SKA3-206ENST00000475251 HERC2O95714 4834 aa9.43□□□□□ -0.9
SKA3-206ENST00000475251 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 A0A0A6YYD4 124 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 IGKV1-6A0A0C4DH72 117 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 SRRM4A7MD48 611 aaKnown RBP9.42□□□□□ -0.9
SKA3-206ENST00000475251 PPP5D1E7EU14 171 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 UBE2CO00762 179 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 SOCS1O15524 211 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 SPRY2O43597 315 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 OR2J3O76001 311 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 DIRAS3O95661 229 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 PRH1P02810 166 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 ZNF45Q02386 682 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 LRRTM1Q86UE6 522 aa9.42□□□□□ -0.9
SKA3-206ENST00000475251 MMD2Q8IY49 270 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms