RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 A0A0B4J203 849 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 SHISA3A0PJX4 238 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 MSGN1A6NI15 193 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 RTL8BQ17RB0 113 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 MRGPRG-AS1Q2M3A8 158 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 IGSF11Q5DX21 431 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 OR10J5Q8NHC4 309 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 SNAPC3Q92966 411 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 PLEKHA3Q9HB20 300 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 PEMTQ9UBM1 199 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 CEPT1Q9Y6K0 416 aa18.89■□□□□ 0.61
TMEM54-205ENST00000475208 JTBO76095 146 aa18.88■□□□□ 0.61
TMEM54-205ENST00000475208 OR9G9P0C7N8 305 aa18.88■□□□□ 0.61
TMEM54-205ENST00000475208 RPS25P62851 125 aaKnown RBP18.88■□□□□ 0.61
TMEM54-205ENST00000475208 MRPS15P82914 257 aaKnown RBP18.88■□□□□ 0.61
TMEM54-205ENST00000475208 TAGLNQ01995 201 aaKnown RBP18.88■□□□□ 0.61
TMEM54-205ENST00000475208 FAM3DQ96BQ1 224 aa18.88■□□□□ 0.61
TMEM54-205ENST00000475208 FAM110AQ9BQ89 295 aa18.88■□□□□ 0.61
TMEM54-205ENST00000475208 NKX1-2Q9UD57 310 aaPredicted RBP18.88■□□□□ 0.61
TMEM54-205ENST00000475208 ARL6IP5O75915 188 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 FCGR3AP08637 254 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 GSTT2P0CG29 244 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 GSTT2BP0CG30 244 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 MECP2P51608 486 aaKnown RBP18.87■□□□□ 0.61
TMEM54-205ENST00000475208 CD81P60033 236 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 TNXAQ16473 311 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 PRSS8Q16651 343 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 C2orf76Q3KRA6 126 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 VMA21Q3ZAQ7 101 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 OR2K2Q8NGT1 345 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 SRSF12Q8WXF0 261 aaKnown RBP18.87■□□□□ 0.61
TMEM54-205ENST00000475208 HIPK2Q9H2X6 1198 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 VCXQ9H320 206 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 KCNK7Q9Y2U2 307 aa18.87■□□□□ 0.61
TMEM54-205ENST00000475208 TRBV6-7A0A0A0MS04 114 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 BMPR1BO00238 502 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 MPPED1O15442 326 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 DENRO43583 198 aaKnown RBP18.86■□□□□ 0.61
TMEM54-205ENST00000475208 HSMCR30P0CW71 290 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 RRASP10301 218 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 UBE2KP61086 200 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 RHOGP84095 191 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 PLA2G7Q13093 441 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 EXOSC2Q13868 293 aaKnown RBP18.86■□□□□ 0.61
TMEM54-205ENST00000475208 IRF3Q14653 427 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 LINC00322Q6ZN03 302 aaPredicted RBP18.86■□□□□ 0.61
TMEM54-205ENST00000475208 IDO2Q6ZQW0 420 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 TEX45Q8NA69 505 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 AKIP1Q9NQ31 210 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 SCN3BQ9NY72 215 aa18.86■□□□□ 0.61
TMEM54-205ENST00000475208 ZNF230Q9UIE0 474 aaPredicted RBP18.86■□□□□ 0.61
TMEM54-205ENST00000475208 RBM7Q9Y580 266 aaKnown RBP18.86■□□□□ 0.61
TMEM54-205ENST00000475208 TMEM272A0A1B0GTI8 110 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 AIREO43918 545 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 TPPPO94811 219 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 PRH1P02810 166 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 CALRP27797 417 aaKnown RBP18.85■□□□□ 0.61
TMEM54-205ENST00000475208 TPBGQ13641 420 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 IL17DQ8TAD2 202 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 ACOT12Q8WYK0 555 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 MAFIPQ8WZ33 124 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 RAB3CQ96E17 227 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 NEURL2Q9BR09 285 aa18.85■□□□□ 0.61
TMEM54-205ENST00000475208 FAM223BA6NKX1 122 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 DIRAS3O95661 229 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 CRYZL1O95825 349 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 PLECQ15149 4684 aaKnown RBP18.84■□□□□ 0.61
TMEM54-205ENST00000475208 TRAM1Q15629 374 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 CD300EQ496F6 205 aaPredicted RBP18.84■□□□□ 0.61
TMEM54-205ENST00000475208 FAM223AQ8IWN6 122 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 LAX1Q8IWV1 398 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 DDB2Q92466 427 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 ADTRPQ96IZ2 230 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 RAB22AQ9UL26 194 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 V9GY05 133 aa18.84■□□□□ 0.61
TMEM54-205ENST00000475208 DUTP33316 252 aaKnown RBP18.83■□□□□ 0.6
TMEM54-205ENST00000475208 ZNF45Q02386 682 aa18.83■□□□□ 0.6
TMEM54-205ENST00000475208 ATP5G2Q06055 141 aa18.83■□□□□ 0.6
TMEM54-205ENST00000475208 HES5Q5TA89 166 aa18.83■□□□□ 0.6
TMEM54-205ENST00000475208 DYNLRB2Q8TF09 96 aa18.83■□□□□ 0.6
TMEM54-205ENST00000475208 NRG4Q8WWG1 115 aa18.83■□□□□ 0.6
TMEM54-205ENST00000475208 GINS4Q9BRT9 223 aa18.83■□□□□ 0.6
TMEM54-205ENST00000475208 SLC2A8Q9NY64 477 aa18.83■□□□□ 0.6
TMEM54-205ENST00000475208 CD7P09564 240 aa18.82■□□□□ 0.6
TMEM54-205ENST00000475208 PSMA1P25786 263 aaKnown RBP18.82■□□□□ 0.6
TMEM54-205ENST00000475208 RANBP1P43487 201 aa18.82■□□□□ 0.6
TMEM54-205ENST00000475208 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.81■□□□□ 0.6
TMEM54-205ENST00000475208 TRBV9A0A0B4J1U6 114 aa18.81■□□□□ 0.6
TMEM54-205ENST00000475208 LINC00473A8K010 186 aa18.81■□□□□ 0.6
TMEM54-205ENST00000475208 ZNF785A8K8V0 405 aa18.81■□□□□ 0.6
TMEM54-205ENST00000475208 TUSC2O75896 110 aa18.81■□□□□ 0.6
TMEM54-205ENST00000475208 GNB3P16520 340 aa18.81■□□□□ 0.6
TMEM54-205ENST00000475208 FABP5Q01469 135 aa18.81■□□□□ 0.6
TMEM54-205ENST00000475208 DEFB125Q8N687 156 aa18.81■□□□□ 0.6
TMEM54-205ENST00000475208 OSR1Q8TAX0 266 aaPredicted RBP18.81■□□□□ 0.6
TMEM54-205ENST00000475208 WFDC10AQ9H1F0 79 aa18.81■□□□□ 0.6
TMEM54-205ENST00000475208 ZNF430Q9H8G1 570 aaPredicted RBP18.81■□□□□ 0.6
TMEM54-205ENST00000475208 ALMS1Q8TCU4 4167 aa18.81■□□□□ 0.6
TMEM54-205ENST00000475208 A0A075B6Q4 140 aa18.8■□□□□ 0.6
TMEM54-205ENST00000475208 RBMY1BA6NDE4 496 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms