RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 I3L521 148 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 SHOXO15266 292 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 EGR2P11161 476 aaPredicted RBP7.32□□□□□ -1.24
PDPN-204ENST00000475043 DTYMKP23919 212 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 CRIP2P52943 208 aaPredicted RBP7.32□□□□□ -1.24
PDPN-204ENST00000475043 TPPP2P59282 170 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 DGCR2P98153 550 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 PITPNAQ00169 270 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 FHL3Q13643 280 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 FXYD3Q14802 87 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 SRSF7Q16629 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDPN-204ENST00000475043 RTL8BQ17RB0 113 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 ZNF260Q3ZCT1 412 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 KCTD21Q4G0X4 260 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 AKIRIN2Q53H80 203 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 PYHIN1Q6K0P9 492 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 Q6ZS49 121 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 H1FOOQ8IZA3 346 aaPredicted RBP7.32□□□□□ -1.24
PDPN-204ENST00000475043 ARPC1AQ92747 370 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 ALX4Q9H161 411 aaPredicted RBP7.32□□□□□ -1.24
PDPN-204ENST00000475043 DCSTAMPQ9H295 470 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDPN-204ENST00000475043 ZNF355PQ9NSJ1 428 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 RHBDL2Q9NX52 303 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 NOTCH3Q9UM47 2321 aa7.32□□□□□ -1.24
PDPN-204ENST00000475043 PRKDCP78527 4128 aaKnown RBP7.31□□□□□ -1.24
PDPN-204ENST00000475043 RAMP3O60896 148 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 IGHV3-11P01762 117 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 CTXN2P0C2S0 81 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 RRASP10301 218 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 NFYAP23511 347 aaPredicted RBP7.31□□□□□ -1.24
PDPN-204ENST00000475043 ECI1P42126 302 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 LGALS7P47929 136 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 RUNX1Q01196 453 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 TAGLNQ01995 201 aaKnown RBP7.31□□□□□ -1.24
PDPN-204ENST00000475043 PJVKQ0ZLH3 352 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 C19orf54Q5BKX5 351 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 OR5H6Q8NGV6 325 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 C5orf30Q96GV9 206 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 ADTRPQ96IZ2 230 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 DCUN1D5Q9BTE7 237 aa7.31□□□□□ -1.24
PDPN-204ENST00000475043 TRAV18A0A075B6X5 111 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 LINC00473A8K010 186 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 OVOL1O14753 267 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 ARPC1BO15143 372 aaKnown RBP7.3□□□□□ -1.24
PDPN-204ENST00000475043 SSX5O60225 188 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 TUSC2O75896 110 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 CRYZL1O95825 349 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 IGLV2-23P01705 113 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 TRGV3P03979 118 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 LGALS1P09382 135 aaKnown RBP7.3□□□□□ -1.24
PDPN-204ENST00000475043 DUTP33316 252 aaKnown RBP7.3□□□□□ -1.24
PDPN-204ENST00000475043 SLURP1P55000 103 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 SCAND1P57086 179 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 CD69Q07108 199 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 VMA21Q3ZAQ7 101 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 TIMM50Q3ZCQ8 353 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 TMEM177Q53S58 311 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 ASPHD1Q5U4P2 390 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 CNIH2Q6PI25 160 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 ZNF645Q8N7E2 425 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 OR5T1Q8NG75 326 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 DCUN1D4Q92564 292 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 PRR25Q96S07 402 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 PHB2Q99623 299 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 SLA2Q9H6Q3 261 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 VCX3AQ9NNX9 186 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 SCOCQ9UIL1 159 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 ANXA10Q9UJ72 324 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 OR2W1Q9Y3N9 320 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 ETV7Q9Y603 341 aa7.3□□□□□ -1.24
PDPN-204ENST00000475043 IGHV4OR15-8A0A075B7B6 117 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 A0A087WW49 117 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 SRRM4A7MD48 611 aaKnown RBP7.29□□□□□ -1.24
PDPN-204ENST00000475043 LINC01619G3V211 115 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 FCGR3BO75015 233 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 SAP30O75446 220 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 LY86O95711 162 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 HLA-DQB1P01920 261 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 FCER2P06734 321 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 CRYGBP07316 175 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 APELAP0DMC3 54 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 TGFBR1P36897 503 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 ARPC4P59998 168 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 LSM3P62310 102 aaKnown RBP7.29□□□□□ -1.24
PDPN-204ENST00000475043 DCTN2Q13561 401 aaKnown RBP7.29□□□□□ -1.24
PDPN-204ENST00000475043 TNXAQ16473 311 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 OR2B11Q5JQS5 317 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 IDO2Q6ZQW0 420 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 KCTD9Q7L273 389 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 BEST4Q8NFU0 473 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 TSPAN14Q8NG11 270 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 ACOT12Q8WYK0 555 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 DDB2Q92466 427 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 DLX4Q92988 240 aaPredicted RBP7.29□□□□□ -1.24
PDPN-204ENST00000475043 SLC25A38Q96DW6 304 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 DIABLOQ9NR28 239 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 SPATA2Q9UM82 520 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 PRELID3BQ9Y3B1 194 aa7.29□□□□□ -1.24
PDPN-204ENST00000475043 A0A087WXM4 84 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms