RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 RNF212BA8MTL3 300 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 INMT-MINDY4F8WBC2 141 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 RAMP3O60896 148 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 FCGR3BO75015 233 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 CRLF1O75462 422 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 VENTXO95231 258 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 SFT2D2O95562 160 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 IGKV1-16P04430 117 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 SNRNP70P08621 437 aaKnown RBP8.02□□□□□ -1.13
COL8A1-206ENST00000474648 SRD5A1P18405 259 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 S100GP29377 79 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 MC5RP33032 325 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 IER3P46695 156 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 RAG2P55895 527 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 UBE2MP61081 183 aaKnown RBP8.02□□□□□ -1.13
COL8A1-206ENST00000474648 TAGLNQ01995 201 aaKnown RBP8.02□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM187Q14656 261 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM128Q5BJH2 165 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 OR2B11Q5JQS5 317 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 SGPP2Q8IWX5 399 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 SPAG16Q8N0X2 631 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 Q8N6K4 173 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 SIGLECL1Q8N7X8 197 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 GLYATL2Q8WU03 294 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 GALNT14Q96FL9 552 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.13
COL8A1-206ENST00000474648 SSX3Q99909 188 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 SLC35D1Q9NTN3 355 aa8.02□□□□□ -1.13
COL8A1-206ENST00000474648 C9orf170A2RU37 121 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 A6NDX4 124 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 SRRM4A7MD48 611 aaKnown RBP8.01□□□□□ -1.13
COL8A1-206ENST00000474648 H0Y980 276 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 RBFOX2O43251 390 aaKnown RBP eCLIP8.01□□□□□ -1.13
COL8A1-206ENST00000474648 PEX14O75381 377 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 IGKV1-39P01597 117 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 IGKV1D-39P04432 117 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 IL5P05113 134 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 OR5AC1P0C628 307 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 OR4E1P0C645 316 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 RRASP10301 218 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 UCP1P25874 307 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 BRS3P32247 399 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 KIR2DS2P43631 304 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 LPAR6P43657 344 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 TAS2R31P59538 309 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 CATR1Q13166 79 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 LRRC75BQ2VPJ9 315 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM177Q53S58 311 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 PDPNQ86YL7 162 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 TCTEX1D1Q8N7M0 179 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 PLSCR3Q9NRY6 295 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 FAM212BQ9NTI7 297 aaPredicted RBP8.01□□□□□ -1.13
COL8A1-206ENST00000474648 PRR13Q9NZ81 148 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 KCNIP3Q9Y2W7 256 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 PRELID3BQ9Y3B1 194 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 WASHC3Q9Y3C0 194 aa8.01□□□□□ -1.13
COL8A1-206ENST00000474648 A0A0B4J293 547 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 H3BUX3 64 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 H7C2Y5 167 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 B3GALNT1O75752 331 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 S1PR2O95136 353 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 CDS2O95674 445 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 CRYZL1O95825 349 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 HPRT1P00492 218 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 MOSP00540 346 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 IGKV1D-33P01593 117 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 IGKV1-33P01594 117 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 IGLV2-23P01705 113 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 IGHV4-59P01825 116 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 APOA2P02652 100 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 FAM106CPP0CH98 169 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 DHRS2Q13268 280 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 HNF4GQ14541 408 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 SLC9A3R2Q15599 337 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 RTL8BQ17RB0 113 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 TRIM16LQ309B1 348 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 ANKRD55Q3KP44 614 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 LYG2Q86SG7 212 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 SELENOHQ8IZQ5 122 aaKnown RBP8□□□□□ -1.13
COL8A1-206ENST00000474648 MINDY2Q8NBR6 621 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 OR52B4Q8NGK2 314 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 OR2T10Q8NGZ9 312 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 LHFPL5Q8TAF8 219 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 CD300LFQ8TDQ1 290 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 FLYWCH2Q96CP2 140 aaKnown RBP8□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM56Q96MV1 263 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 RNF5Q99942 180 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 SEC22CQ9BRL7 303 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM222Q9H0R3 208 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 PLEKHA2Q9HB19 425 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 LIN7CQ9NUP9 197 aaKnown RBP8□□□□□ -1.13
COL8A1-206ENST00000474648 TCF19Q9Y242 345 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM56-RWDD3S4R434 201 aa8□□□□□ -1.13
COL8A1-206ENST00000474648 NIPBLQ6KC79 2804 aaeCLIP7.99□□□□□ -1.13
COL8A1-206ENST00000474648 HOXA3O43365 443 aaPredicted RBP7.99□□□□□ -1.13
COL8A1-206ENST00000474648 IFNA2P01563 188 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 SERPINE2P07093 398 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 CRYGBP07316 175 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 IL6RP08887 468 aaPredicted RBP7.99□□□□□ -1.13
COL8A1-206ENST00000474648 FAM157CP0CG43 387 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms