RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CNIH1O95406 144 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 CRYGBP07316 175 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 NFYAP23511 347 aaPredicted RBP8.69□□□□□ -1.02
CKS1B-206ENST00000474215 CD40LGP29965 261 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 DUTP33316 252 aaKnown RBP8.69□□□□□ -1.02
CKS1B-206ENST00000474215 TGFBR1P36897 503 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 PJVKQ0ZLH3 352 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 FHL3Q13643 280 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 ACTBL2Q562R1 376 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 PYHIN1Q6K0P9 492 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 ZNF645Q8N7E2 425 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 CASTOR1Q8WTX7 329 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 ARPC1AQ92747 370 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 HARBI1Q96MB7 349 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 OR5B12Q96R08 314 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 AUNIPQ9H7T9 357 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 ZMAT5Q9UDW3 170 aaKnown RBP8.69□□□□□ -1.02
CKS1B-206ENST00000474215 WI2-2373I1.2A0A1W2PRP0 233 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 TRIM64CA6NLI5 447 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 SRRM4A7MD48 611 aaKnown RBP8.68□□□□□ -1.02
CKS1B-206ENST00000474215 LINC00473A8K010 186 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 K7EIL1 84 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 ARPC1BO15143 372 aaKnown RBP8.68□□□□□ -1.02
CKS1B-206ENST00000474215 OR8U8P0C7N1 319 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 LSM3P62310 102 aaKnown RBP8.68□□□□□ -1.02
CKS1B-206ENST00000474215 GNB1P62873 340 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 ZNF616Q08AN1 781 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 HOGA1Q86XE5 327 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 BEST4Q8NFU0 473 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 GRPEL2Q8TAA5 225 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 S100A16Q96FQ6 103 aaKnown RBP8.68□□□□□ -1.02
CKS1B-206ENST00000474215 MS4A10Q96PG2 267 aa8.68□□□□□ -1.02
CKS1B-206ENST00000474215 PRKDCP78527 4128 aaKnown RBP8.68□□□□□ -1.02
CKS1B-206ENST00000474215 IGKV1D-13A0A0B4J2D9 117 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 XRCC3O43542 346 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 TUSC2O75896 110 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 CRYZL1O95825 349 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 IGKV1-13P0DP09 117 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 ARPC4P59998 168 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 UBE2KP61086 200 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 SSBP2P81877 361 aaPredicted RBP8.67□□□□□ -1.02
CKS1B-206ENST00000474215 DGCR2P98153 550 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 VMA21Q3ZAQ7 101 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 DEFB121Q5J5C9 76 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 C9orf66Q5T8R8 295 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 GVQW1Q8N7I0 195 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 TEX45Q8NA69 505 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 OSR1Q8TAX0 266 aaPredicted RBP8.67□□□□□ -1.02
CKS1B-206ENST00000474215 SLA2Q9H6Q3 261 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 RBMX2Q9Y388 322 aaKnown RBP8.67□□□□□ -1.02
CKS1B-206ENST00000474215 PRELID3BQ9Y3B1 194 aa8.67□□□□□ -1.02
CKS1B-206ENST00000474215 SEC14L6B5MCN3 397 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 RAMP3O60896 148 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 FCGR3BO75015 233 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 IGLV2-14P01704 120 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 TRGV3P03979 118 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 LGALS1P09382 135 aaKnown RBP8.66□□□□□ -1.02
CKS1B-206ENST00000474215 PTHLHP12272 177 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 FCGR2CP31995 323 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 CBX5P45973 191 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 PRSS8Q16651 343 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 MRGPRG-AS1Q2M3A8 158 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 ASPHD1Q5U4P2 390 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 KCTD9Q7L273 389 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 SAMD12Q8N8I0 201 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 OR5T1Q8NG75 326 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 RHOVQ96L33 236 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 TMEM68Q96MH6 324 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 HSD17B10Q99714 261 aaKnown RBP8.66□□□□□ -1.02
CKS1B-206ENST00000474215 DCUN1D5Q9BTE7 237 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 FUNDC2Q9BWH2 189 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 ALX4Q9H161 411 aaPredicted RBP8.66□□□□□ -1.02
CKS1B-206ENST00000474215 ZNF355PQ9NSJ1 428 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 SCOCQ9UIL1 159 aa8.66□□□□□ -1.02
CKS1B-206ENST00000474215 MSGN1A6NI15 193 aa8.65□□□□□ -1.02
CKS1B-206ENST00000474215 H3BUA1 57 aa8.65□□□□□ -1.02
CKS1B-206ENST00000474215 TPPP2P59282 170 aa8.65□□□□□ -1.02
CKS1B-206ENST00000474215 RPL30P62888 115 aaKnown RBP8.65□□□□□ -1.02
CKS1B-206ENST00000474215 EIF4EBP1Q13541 118 aaPredicted RBP8.65□□□□□ -1.02
CKS1B-206ENST00000474215 UBE2NLQ5JXB2 153 aa8.65□□□□□ -1.02
CKS1B-206ENST00000474215 OVCH2Q7RTZ1 564 aa8.65□□□□□ -1.02
CKS1B-206ENST00000474215 POC5Q8NA72 575 aa8.65□□□□□ -1.02
CKS1B-206ENST00000474215 OR5AP2Q8NGF4 316 aa8.65□□□□□ -1.02
CKS1B-206ENST00000474215 DCUN1D4Q92564 292 aa8.65□□□□□ -1.02
CKS1B-206ENST00000474215 SLC25A46Q96AG3 418 aa8.65□□□□□ -1.02
CKS1B-206ENST00000474215 KCTD12Q96CX2 325 aaKnown RBP8.65□□□□□ -1.02
CKS1B-206ENST00000474215 MRPS7Q9Y2R9 242 aaKnown RBP8.65□□□□□ -1.02
CKS1B-206ENST00000474215 A0A0G2JLM5 398 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 LINC01619G3V211 115 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 OVOL1O14753 267 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 BRI3O95415 125 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 IGHV3-11P01762 117 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 HSPB1P04792 205 aaKnown RBP8.64□□□□□ -1.03
CKS1B-206ENST00000474215 FCER2P06734 321 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 AADACP22760 399 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 INSL3P51460 131 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 VBP1P61758 197 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 NCS1P62166 190 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 CDK10Q15131 360 aa8.64□□□□□ -1.03
CKS1B-206ENST00000474215 MSMO1Q15800 293 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms