RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 GAB2Q9UQC2 676 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 DISC1C4P0D8 188 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 SLC6A1P30531 599 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 FAUP35544 74 aaKnown RBP14.72□□□□□ -0.05
CCDC171-206ENST00000474193 TCTEX1D4Q5JR98 221 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 SAMD5Q5TGI4 173 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 TEX38Q6PEX7 206 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 REC114Q7Z4M0 266 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 STPG2Q8N412 459 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 ARRDC1Q8N5I2 433 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 Q8N6K4 173 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 NOL4LQ96MY1 436 aaPredicted RBP14.72□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF251Q9BRH9 671 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 TINAGL1Q9GZM7 467 aaPredicted RBP14.72□□□□□ -0.05
CCDC171-206ENST00000474193 SLC5A7Q9GZV3 580 aa14.72□□□□□ -0.05
CCDC171-206ENST00000474193 ANKRD20A5PA0PJZ0 165 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 NUDT19A8MXV4 375 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 M0R1X1 148 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 CD74P04233 296 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 LSAMPQ13449 338 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 MMDQ15546 238 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF57Q68EA5 555 aaPredicted RBP14.71□□□□□ -0.05
CCDC171-206ENST00000474193 LPCAT3Q6P1A2 487 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 Q8N9W7 124 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 MRPL20Q9BYC9 149 aaKnown RBP14.71□□□□□ -0.05
CCDC171-206ENST00000474193 SDHAF2Q9NX18 166 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 KIAA1456Q9P272 454 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 LINC00527Q9UJ94 153 aa14.71□□□□□ -0.05
CCDC171-206ENST00000474193 DUS4LO95620 317 aaKnown RBP14.7□□□□□ -0.06
CCDC171-206ENST00000474193 S100GP29377 79 aa14.7□□□□□ -0.06
CCDC171-206ENST00000474193 MC5RP33032 325 aa14.7□□□□□ -0.06
CCDC171-206ENST00000474193 BEAN1Q3B7T3 259 aa14.7□□□□□ -0.06
CCDC171-206ENST00000474193 SCGB2B2Q4G0G5 96 aa14.7□□□□□ -0.06
CCDC171-206ENST00000474193 C10orf99Q6UWK7 81 aa14.7□□□□□ -0.06
CCDC171-206ENST00000474193 WFDC9Q8NEX5 89 aa14.7□□□□□ -0.06
CCDC171-206ENST00000474193 MOB3AQ96BX8 217 aa14.7□□□□□ -0.06
CCDC171-206ENST00000474193 WDR12Q9GZL7 423 aaKnown RBP14.7□□□□□ -0.06
CCDC171-206ENST00000474193 AKIP1Q9NQ31 210 aa14.7□□□□□ -0.06
CCDC171-206ENST00000474193 MCUBQ9NWR8 336 aa14.7□□□□□ -0.06
CCDC171-206ENST00000474193 IGKV1D-13A0A0B4J2D9 117 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 APOA2P02652 100 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 IGKV1-13P0DP09 117 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 VDAC1P21796 283 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 RPL23AP62750 156 aaKnown RBP14.69□□□□□ -0.06
CCDC171-206ENST00000474193 CBX3Q13185 183 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 ZNF846Q147U1 533 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 MSMO1Q15800 293 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 OXLD1Q5BKU9 147 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 CXorf66Q5JRM2 361 aaPredicted RBP14.69□□□□□ -0.06
CCDC171-206ENST00000474193 ZBTB34Q8NCN2 500 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 DEDD2Q8WXF8 326 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 ADTRPQ96IZ2 230 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 PRRT1Q99946 306 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 NABP2Q9BQ15 211 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 GPR61Q9BZJ8 451 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 PLSCR3Q9NRY6 295 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 SCP2D1Q9UJQ7 156 aa14.69□□□□□ -0.06
CCDC171-206ENST00000474193 NOTCH3Q9UM47 2321 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 OR5H14A6NHG9 310 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 H7C2Y5 167 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 CT45A6P0DMU7 189 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 CT45A5P0DMU8 189 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 CT45A7P0DMV0 189 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 THBS3P49746 956 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 F2RL1P55085 397 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 TAGLNQ01995 201 aaKnown RBP14.68□□□□□ -0.06
CCDC171-206ENST00000474193 KPRPQ5T749 579 aaPredicted RBP14.68□□□□□ -0.06
CCDC171-206ENST00000474193 ZNF660Q6AZW8 331 aaPredicted RBP14.68□□□□□ -0.06
CCDC171-206ENST00000474193 CMTM1Q8IZ96 169 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 MFSD4AQ8N468 514 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 DRAXINQ8NBI3 349 aaPredicted RBP14.68□□□□□ -0.06
CCDC171-206ENST00000474193 OR4D10Q8NGI6 311 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 OR4C16Q8NGL9 310 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 TRIM63Q969Q1 353 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 RCC1LQ96I51 464 aaKnown RBP14.68□□□□□ -0.06
CCDC171-206ENST00000474193 CCL28Q9NRJ3 127 aa14.68□□□□□ -0.06
CCDC171-206ENST00000474193 CENPXA8MT69 81 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 PGAM2P15259 253 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 ECI1P42126 302 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 PPP5CP53041 499 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 GLDNQ6ZMI3 551 aaPredicted RBP14.67□□□□□ -0.06
CCDC171-206ENST00000474193 SLC38A6Q8IZM9 456 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 FAM71E2Q8N5Q1 922 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 TERB2Q8NHR7 220 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 HSD17B10Q99714 261 aaKnown RBP14.67□□□□□ -0.06
CCDC171-206ENST00000474193 CCDC32Q9BV29 185 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 PRELID3BQ9Y3B1 194 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 WASHC3Q9Y3C0 194 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 CMYA5Q8N3K9 4069 aa14.67□□□□□ -0.06
CCDC171-206ENST00000474193 LINC01548A6NM66 108 aa14.66□□□□□ -0.06
CCDC171-206ENST00000474193 NBR2O15453 112 aa14.66□□□□□ -0.06
CCDC171-206ENST00000474193 ELANEP08246 267 aa14.66□□□□□ -0.06
CCDC171-206ENST00000474193 RRASP10301 218 aa14.66□□□□□ -0.06
CCDC171-206ENST00000474193 CD40LGP29965 261 aa14.66□□□□□ -0.06
CCDC171-206ENST00000474193 KLF9Q13886 244 aaPredicted RBP14.66□□□□□ -0.06
CCDC171-206ENST00000474193 BAK1Q16611 211 aa14.66□□□□□ -0.06
CCDC171-206ENST00000474193 RTL8BQ17RB0 113 aa14.66□□□□□ -0.06
CCDC171-206ENST00000474193 LIN54Q6MZP7 749 aa14.66□□□□□ -0.06
CCDC171-206ENST00000474193 FAAP20Q6NZ36 180 aa14.66□□□□□ -0.06
CCDC171-206ENST00000474193 ZNF66Q6ZN08 573 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms