RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 GNB4Q9HAV0 340 aa15.15■□□□□ 0.02
COMMD1-208ENST00000472729 NUBP2Q9Y5Y2 271 aa15.15■□□□□ 0.02
COMMD1-208ENST00000472729 IGKV1D-8A0A087WSZ0 117 aa15.14■□□□□ 0.01
COMMD1-208ENST00000472729 CREBL2O60519 120 aaPredicted RBP15.14■□□□□ 0.01
COMMD1-208ENST00000472729 RAMP3O60896 148 aa15.14■□□□□ 0.01
COMMD1-208ENST00000472729 CRIP2P52943 208 aaPredicted RBP15.14■□□□□ 0.01
COMMD1-208ENST00000472729 TPPP2P59282 170 aa15.14■□□□□ 0.01
COMMD1-208ENST00000472729 EGFEM1PQ0D2K5 195 aa15.14■□□□□ 0.01
COMMD1-208ENST00000472729 OR5H6Q8NGV6 325 aa15.14■□□□□ 0.01
COMMD1-208ENST00000472729 MYOZ3Q8TDC0 251 aa15.14■□□□□ 0.01
COMMD1-208ENST00000472729 SPATA2Q9UM82 520 aa15.14■□□□□ 0.01
COMMD1-208ENST00000472729 FBXO7Q9Y3I1 522 aa15.14■□□□□ 0.01
COMMD1-208ENST00000472729 CRYZL1O95825 349 aa15.13■□□□□ 0.01
COMMD1-208ENST00000472729 DUTP33316 252 aaKnown RBP15.13■□□□□ 0.01
COMMD1-208ENST00000472729 CBX5P45973 191 aa15.13■□□□□ 0.01
COMMD1-208ENST00000472729 KRTAP10-11P60412 298 aa15.13■□□□□ 0.01
COMMD1-208ENST00000472729 LSM3P62310 102 aaKnown RBP15.13■□□□□ 0.01
COMMD1-208ENST00000472729 RUNX1Q01196 453 aa15.13■□□□□ 0.01
COMMD1-208ENST00000472729 TMEM177Q53S58 311 aa15.13■□□□□ 0.01
COMMD1-208ENST00000472729 KCTD9Q7L273 389 aa15.13■□□□□ 0.01
COMMD1-208ENST00000472729 BEST4Q8NFU0 473 aa15.13■□□□□ 0.01
COMMD1-208ENST00000472729 OSR1Q8TAX0 266 aaPredicted RBP15.13■□□□□ 0.01
COMMD1-208ENST00000472729 CASTOR1Q8WTX7 329 aa15.13■□□□□ 0.01
COMMD1-208ENST00000472729 TMEM68Q96MH6 324 aa15.13■□□□□ 0.01
COMMD1-208ENST00000472729 I3L521 148 aa15.12■□□□□ 0.01
COMMD1-208ENST00000472729 MPPED1O15442 326 aa15.12■□□□□ 0.01
COMMD1-208ENST00000472729 FCGR3BO75015 233 aa15.12■□□□□ 0.01
COMMD1-208ENST00000472729 HLA-DQB1P01920 261 aa15.12■□□□□ 0.01
COMMD1-208ENST00000472729 TRGV3P03979 118 aa15.12■□□□□ 0.01
COMMD1-208ENST00000472729 EGR2P11161 476 aaPredicted RBP15.12■□□□□ 0.01
COMMD1-208ENST00000472729 IFT46Q9NQC8 304 aa15.12■□□□□ 0.01
COMMD1-208ENST00000472729 TPSG1Q9NRR2 321 aa15.12■□□□□ 0.01
COMMD1-208ENST00000472729 A0A0G2JLM5 398 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 C13orf42A0A1B0GVH6 325 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 LINC01619G3V211 115 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 SSX5O60225 188 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 UBE2KP61086 200 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 FHL3Q13643 280 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 TEX45Q8NA69 505 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 OR5T1Q8NG75 326 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 TCTEX1D2Q8WW35 142 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 ACOT12Q8WYK0 555 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 SLC25A38Q96DW6 304 aa15.11■□□□□ 0.01
COMMD1-208ENST00000472729 HSD17B10Q99714 261 aaKnown RBP15.11■□□□□ 0.01
COMMD1-208ENST00000472729 RBMX2Q9Y388 322 aaKnown RBP15.11■□□□□ 0.01
COMMD1-208ENST00000472729 SOX15O60248 233 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 IGLV2-23P01705 113 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 IGHV3-11P01762 117 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 LGALS1P09382 135 aaKnown RBP15.1■□□□□ 0.01
COMMD1-208ENST00000472729 INSL3P51460 131 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 KIAA0141Q14154 515 aaPredicted RBP15.1■□□□□ 0.01
COMMD1-208ENST00000472729 TNXAQ16473 311 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 UBE2NLQ5JXB2 153 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 TMEM69Q5SWH9 247 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 HOGA1Q86XE5 327 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 SAMD12Q8N8I0 201 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 POC5Q8NA72 575 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 AUNIPQ9H7T9 357 aa15.1■□□□□ 0.01
COMMD1-208ENST00000472729 SMIM31A0A1B0GVY4 71 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 WI2-2373I1.2A0A1W2PRP0 233 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 H3BUA1 57 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 K7EIL1 84 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 OVOL1O14753 267 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 FCGR2CP31995 323 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 RPS19P39019 145 aaKnown RBP15.09■□□□□ 0.01
COMMD1-208ENST00000472729 ECI1P42126 302 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 PJVKQ0ZLH3 352 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 C19orf54Q5BKX5 351 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 OR2B11Q5JQS5 317 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 OR4S2Q8NH73 311 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 SECTM1Q8WVN6 248 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 YIPF6Q96EC8 236 aa15.09■□□□□ 0.01
COMMD1-208ENST00000472729 MSGN1A6NI15 193 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 SRRM4A7MD48 611 aaKnown RBP15.08■□□□□ 0
COMMD1-208ENST00000472729 LINC00473A8K010 186 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 ARPC1BO15143 372 aaKnown RBP15.08■□□□□ 0
COMMD1-208ENST00000472729 XRCC3O43542 346 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 HSPB1P04792 205 aaKnown RBP15.08■□□□□ 0
COMMD1-208ENST00000472729 FCER2P06734 321 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 ZNF429Q86V71 674 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 GVQW1Q8N7I0 195 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 VSTM2AQ8TAG5 236 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 DDB2Q92466 427 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 C5orf30Q96GV9 206 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 AIFM2Q9BRQ8 373 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 ALX4Q9H161 411 aaPredicted RBP15.08■□□□□ 0
COMMD1-208ENST00000472729 COA4Q9NYJ1 87 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 TAS2R8Q9NYW2 309 aa15.08■□□□□ 0
COMMD1-208ENST00000472729 SAP30O75446 220 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 LY86O95711 162 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 CRYGBP07316 175 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 AADACP22760 399 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 TGFBR1P36897 503 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 CD69Q07108 199 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 PRSS8Q16651 343 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 ZNF66Q6ZN08 573 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 IDO2Q6ZQW0 420 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 OR13F1Q8NGS4 319 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 DCUN1D4Q92564 292 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 BORCS5Q969J3 196 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms