RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 ACTBL2Q562R1 376 aa13.28□□□□□ -0.28
COMMD3-210ENST00000472610 OSR1Q8TAX0 266 aaPredicted RBP13.28□□□□□ -0.28
COMMD3-210ENST00000472610 ARPC1AQ92747 370 aa13.28□□□□□ -0.28
COMMD3-210ENST00000472610 SLC25A46Q96AG3 418 aa13.28□□□□□ -0.28
COMMD3-210ENST00000472610 AURKAIP1Q9NWT8 199 aaPredicted RBP13.28□□□□□ -0.28
COMMD3-210ENST00000472610 RBMX2Q9Y388 322 aaKnown RBP13.28□□□□□ -0.28
COMMD3-210ENST00000472610 PRELID3BQ9Y3B1 194 aa13.28□□□□□ -0.28
COMMD3-210ENST00000472610 A3GALT2U3KPV4 340 aa13.28□□□□□ -0.28
COMMD3-210ENST00000472610 LINC00473A8K010 186 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 I3L521 148 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 TUSC2O75896 110 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 CNIH1O95406 144 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 CRYGBP07316 175 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 RAB25P57735 213 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 VMA21Q3ZAQ7 101 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 GVQW1Q8N7I0 195 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 SAMD12Q8N8I0 201 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 TEX45Q8NA69 505 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 LFNGQ8NES3 379 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 OR11H1Q8NG94 326 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 OR13F1Q8NGS4 319 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 MRAPQ8TCY5 172 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 TMEM68Q96MH6 324 aa13.27□□□□□ -0.29
COMMD3-210ENST00000472610 FAM103A1Q9BTL3 118 aaKnown RBP13.27□□□□□ -0.29
COMMD3-210ENST00000472610 SOX15O60248 233 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 CRYZL1O95825 349 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 EGFEM1PQ0D2K5 195 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 FHL3Q13643 280 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 KCTD9Q7L273 389 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 OR1N2Q8NGR9 330 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 CMTM3Q96MX0 182 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 HSD17B10Q99714 261 aaKnown RBP13.26□□□□□ -0.29
COMMD3-210ENST00000472610 SLA2Q9H6Q3 261 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 GNB4Q9HAV0 340 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 TPSG1Q9NRR2 321 aa13.26□□□□□ -0.29
COMMD3-210ENST00000472610 MRPS7Q9Y2R9 242 aaKnown RBP13.26□□□□□ -0.29
COMMD3-210ENST00000472610 IGKV1D-13A0A0B4J2D9 117 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 SRRM4A7MD48 611 aaKnown RBP13.25□□□□□ -0.29
COMMD3-210ENST00000472610 ARPC1BO15143 372 aaKnown RBP13.25□□□□□ -0.29
COMMD3-210ENST00000472610 OR8U8P0C7N1 319 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 IGKV1-13P0DP09 117 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 UBE2KP61086 200 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 VBP1P61758 197 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 ZNF616Q08AN1 781 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 MSMO1Q15800 293 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 TMEM69Q5SWH9 247 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 OVCH2Q7RTZ1 564 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 OR5AP2Q8NGF4 316 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 GRPEL2Q8TAA5 225 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 ACOT12Q8WYK0 555 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 DCUN1D5Q9BTE7 237 aa13.25□□□□□ -0.29
COMMD3-210ENST00000472610 H3BUA1 57 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 CREBL2O60519 120 aaPredicted RBP13.24□□□□□ -0.29
COMMD3-210ENST00000472610 FCGR3BO75015 233 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 IGLV2-14P01704 120 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 FCGR2CP31995 323 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 NCS1P62166 190 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 GNB1P62873 340 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 C9orf66Q5T8R8 295 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 ZNF66Q6ZN08 573 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 ZBTB34Q8NCN2 500 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 IFT46Q9NQC8 304 aa13.24□□□□□ -0.29
COMMD3-210ENST00000472610 SMIM31A0A1B0GVY4 71 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 PPYP01298 95 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 PTHLHP12272 177 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 HOXD3P31249 432 aaPredicted RBP13.23□□□□□ -0.29
COMMD3-210ENST00000472610 TAS2R20P59543 309 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 PJVKQ0ZLH3 352 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 CDK10Q15131 360 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 MFSD4AQ8N468 514 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 GIMAP1Q8WWP7 306 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 OR5B12Q96R08 314 aa13.23□□□□□ -0.29
COMMD3-210ENST00000472610 APOA1P02647 267 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 TRGV3P03979 118 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 LGALS1P09382 135 aaKnown RBP13.22□□□□□ -0.29
COMMD3-210ENST00000472610 SMIM18P0DKX4 95 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 AADACP22760 399 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 PRSS3P35030 304 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 RORCP51449 518 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 TPPP2P59282 170 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 KRTAP10-11P60412 298 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 RPL30P62888 115 aaKnown RBP13.22□□□□□ -0.29
COMMD3-210ENST00000472610 SSBP2P81877 361 aaPredicted RBP13.22□□□□□ -0.29
COMMD3-210ENST00000472610 EIF4EBP1Q13541 118 aaPredicted RBP13.22□□□□□ -0.29
COMMD3-210ENST00000472610 PRSS8Q16651 343 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 POC5Q8NA72 575 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 OR4S2Q8NH73 311 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 CASTOR1Q8WTX7 329 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 SECTM1Q8WVN6 248 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 TCTEX1D2Q8WW35 142 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 SNAPC3Q92966 411 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 MS4A10Q96PG2 267 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 ZNF355PQ9NSJ1 428 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 COMMD3Q9UBI1 195 aa13.22□□□□□ -0.29
COMMD3-210ENST00000472610 MEIS3P1A6NDR6 274 aa13.21□□□□□ -0.29
COMMD3-210ENST00000472610 SEC14L6B5MCN3 397 aa13.21□□□□□ -0.29
COMMD3-210ENST00000472610 RAMP3O60896 148 aa13.21□□□□□ -0.29
COMMD3-210ENST00000472610 ACTL6BO94805 426 aa13.21□□□□□ -0.29
COMMD3-210ENST00000472610 BRI3O95415 125 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms