RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ZNF385DQ9H6B1 395 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 G6PC2Q9NQR9 355 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 DLL3Q9NYJ7 618 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 FOXA2Q9Y261 457 aaPredicted RBP7.31□□□□□ -1.24
CD47-204ENST00000471694 COL4A5P29400 1685 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 TCF20Q9UGU0 1960 aaKnown RBP7.31□□□□□ -1.24
CD47-204ENST00000471694 COL11A1P12107 1806 aaPredicted RBP7.31□□□□□ -1.24
CD47-204ENST00000471694 H7C1H1 209 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 CD24P25063 80 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 PTGDSP41222 190 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 SRSF6Q13247 344 aaKnown RBP7.31□□□□□ -1.24
CD47-204ENST00000471694 ASAH1Q13510 395 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 RAB32Q13637 225 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 PRSS53Q2L4Q9 553 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 TEX261Q6UWH6 196 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 NR2C2APQ86WQ0 139 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 ZCCHC24Q8N2G6 241 aaKnown RBP7.31□□□□□ -1.24
CD47-204ENST00000471694 RAB37Q96AX2 223 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 MMP26Q9NRE1 261 aa7.31□□□□□ -1.24
CD47-204ENST00000471694 MYO5AQ9Y4I1 1855 aaKnown RBP7.3□□□□□ -1.24
CD47-204ENST00000471694 CDK2AP2O75956 126 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 CDX1P47902 265 aaPredicted RBP7.3□□□□□ -1.24
CD47-204ENST00000471694 BRD3OSQ6XYD6 125 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 NCCRP1Q6ZVX7 275 aaPredicted RBP7.3□□□□□ -1.24
CD47-204ENST00000471694 BAP18Q8IXM2 172 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 VKORC1L1Q8N0U8 176 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 MAP1LC3CQ9BXW4 147 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 LINC00470Q9BZP3 86 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 NKX6-2Q9C056 277 aaPredicted RBP7.3□□□□□ -1.24
CD47-204ENST00000471694 NPVFQ9HCQ7 196 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 SOX21Q9Y651 276 aaPredicted RBP7.3□□□□□ -1.24
CD47-204ENST00000471694 IGHV3OR16-8A0A075B7F1 116 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 RAMP1O60894 148 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 CEACAM8P31997 349 aaPredicted RBP7.3□□□□□ -1.24
CD47-204ENST00000471694 LEMD1Q68G75 181 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 LURAP1LQ8IV03 231 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 LRRC75AQ8NAA5 344 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 COPS9Q8WXC6 57 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 SELENOKQ9Y6D0 94 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 THADAQ6YHU6 1953 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 UMODP07911 640 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 PRSS33Q8NF86 280 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 NPAP1Q9NZP6 1156 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 IL36RNQ9UBH0 155 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 AP4M1O00189 453 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 TM4SF5O14894 197 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 BCL2L11O43521 198 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 EVX1P49640 407 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 INSL4Q14641 139 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 C11orf87Q6NUJ2 197 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 TMEM54Q969K7 222 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 LURAP1Q96LR2 239 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 LINC00527Q9UJ94 153 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 A0A0G2JNJ9 132 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 EFNB2P52799 333 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 ZNF672Q499Z4 452 aaPredicted RBP7.3□□□□□ -1.24
CD47-204ENST00000471694 C2orf88Q9BSF0 95 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 SEPSECSQ9HD40 501 aaKnown RBP7.3□□□□□ -1.24
CD47-204ENST00000471694 Q9UFV3 132 aa7.3□□□□□ -1.24
CD47-204ENST00000471694 COL5A3P25940 1745 aaPredicted RBP7.3□□□□□ -1.24
CD47-204ENST00000471694 LHBP01229 141 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 SELENOTP62341 195 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 EFNB1P98172 346 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 FAM122BQ7Z309 247 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 C10orf111Q8N326 155 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 ARL6IP6Q8N6S5 226 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 SDF2L1Q9HCN8 221 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 AKIP1Q9NQ31 210 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 OPN4Q9UHM6 478 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 PLXNA1Q9UIW2 1896 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 H3BTX0 84 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 SCTP09683 121 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 TUBD1Q9UJT1 453 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 SIRT4Q9Y6E7 314 aaPredicted RBP7.29□□□□□ -1.24
CD47-204ENST00000471694 CHCHD2Q9Y6H1 151 aaPredicted RBP7.29□□□□□ -1.24
CD47-204ENST00000471694 IGKV1-8A0A0C4DH67 115 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 J3QR89 54 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 CELA3BP08861 270 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 TRGC1P0CF51 173 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 TCF15Q12870 199 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 KIAA0040Q15053 153 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 IGSF11Q5DX21 431 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 MRPL54Q6P161 138 aaKnown RBP7.29□□□□□ -1.24
CD47-204ENST00000471694 IL17RELQ6ZVW7 336 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 KLHDC1Q8N7A1 406 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 OR5AN1Q8NGI8 311 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 GSX1Q9H4S2 264 aaPredicted RBP7.29□□□□□ -1.24
CD47-204ENST00000471694 PXMP4Q9Y6I8 212 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 LY75O60449 1722 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 UNC13CQ8NB66 2214 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 PITX3O75364 302 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 HNRNPA3P51991 378 aaKnown RBP7.29□□□□□ -1.24
CD47-204ENST00000471694 TMEM42Q69YG0 159 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 SMIM4Q8WVI0 70 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 DMRTA2Q96SC8 542 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 IGLV3-19P01714 112 aa7.29□□□□□ -1.24
CD47-204ENST00000471694 IL6RP08887 468 aaPredicted RBP7.29□□□□□ -1.24
CD47-204ENST00000471694 LGALS3P17931 250 aaKnown RBP7.29□□□□□ -1.24
CD47-204ENST00000471694 RIPPLY3P57055 190 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms