RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 TMEM267Q0VDI3 215 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-203ENST00000471344 CDNFQ49AH0 187 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 H1FOOQ8IZA3 346 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-203ENST00000471344 OR5T1Q8NG75 326 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 LGALS14Q8TCE9 139 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 NUDCD2Q8WVJ2 157 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 GINS4Q9BRT9 223 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 ZMAT5Q9UDW3 170 aaKnown RBP11.83□□□□□ -0.52
COL1A1-203ENST00000471344 DAPK2Q9UIK4 370 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 TMEM235A6NFC5 223 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 NOTOA8MTQ0 251 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 TRGV3P03979 118 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 SDC2P34741 201 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 TALDO1P37837 337 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 MXD1Q05195 221 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 ARL6IP1Q15041 203 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 SRSF7Q16629 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL1A1-203ENST00000471344 PYHIN1Q6K0P9 492 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 IDO2Q6ZQW0 420 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 DDB2Q92466 427 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 RHOVQ96L33 236 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 SSR3Q9UNL2 185 aa11.82□□□□□ -0.52
COL1A1-203ENST00000471344 RBM7Q9Y580 266 aaKnown RBP11.82□□□□□ -0.52
COL1A1-203ENST00000471344 STAB2Q8WWQ8 2551 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 DNAH7Q8WXX0 4024 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 SHOXO15266 292 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 SSX5O60225 188 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 RBMXL2O75526 392 aaKnown RBP11.81□□□□□ -0.52
COL1A1-203ENST00000471344 CNIH1O95406 144 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 SPNP16150 400 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 NFYAP23511 347 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-203ENST00000471344 DUTP33316 252 aaKnown RBP11.81□□□□□ -0.52
COL1A1-203ENST00000471344 LSM3P62310 102 aaKnown RBP11.81□□□□□ -0.52
COL1A1-203ENST00000471344 DCTN2Q13561 401 aaKnown RBP11.81□□□□□ -0.52
COL1A1-203ENST00000471344 TMEM177Q53S58 311 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 Q6ZS49 121 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 TPRA1Q86W33 373 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 POC5Q8NA72 575 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 ST6GALNAC5Q9BVH7 336 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 NAA50Q9GZZ1 169 aaKnown RBP11.81□□□□□ -0.52
COL1A1-203ENST00000471344 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL1A1-203ENST00000471344 ZNF355PQ9NSJ1 428 aa11.81□□□□□ -0.52
COL1A1-203ENST00000471344 IGKV1D-13A0A0B4J2D9 117 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 CRYZL1O95825 349 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 HSPB1P04792 205 aaKnown RBP11.8□□□□□ -0.52
COL1A1-203ENST00000471344 IGKV1-13P0DP09 117 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 DTYMKP23919 212 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 INSL3P51460 131 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 OR2B11Q5JQS5 317 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 HACD4Q5VWC8 232 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 ACSM6Q6P461 480 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 SFXN4Q6P4A7 337 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 ZNF429Q86V71 674 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 OR5H6Q8NGV6 325 aa11.8□□□□□ -0.52
COL1A1-203ENST00000471344 ANKRD34BA5PLL1 514 aa11.79□□□□□ -0.52
COL1A1-203ENST00000471344 IGLV2-14P01704 120 aa11.79□□□□□ -0.52
COL1A1-203ENST00000471344 LGALS7P47929 136 aa11.79□□□□□ -0.52
COL1A1-203ENST00000471344 RPL30P62888 115 aaKnown RBP11.79□□□□□ -0.52
COL1A1-203ENST00000471344 TAGLNQ01995 201 aaKnown RBP11.79□□□□□ -0.52
COL1A1-203ENST00000471344 RTL8BQ17RB0 113 aa11.79□□□□□ -0.52
COL1A1-203ENST00000471344 OR13F1Q8NGS4 319 aa11.79□□□□□ -0.52
COL1A1-203ENST00000471344 SLC25A38Q96DW6 304 aa11.79□□□□□ -0.52
COL1A1-203ENST00000471344 SLA2Q9H6Q3 261 aa11.79□□□□□ -0.52
COL1A1-203ENST00000471344 ADAM30Q9UKF2 790 aa11.79□□□□□ -0.52
COL1A1-203ENST00000471344 SORL1Q92673 2214 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 AIREO43918 545 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 TRBV12-3P01733 135 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 PTHLHP12272 177 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 WWC2-AS2Q96NR7 200 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 GPHA2Q96T91 129 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 FUNDC2Q9BWH2 189 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 RHBDL2Q9NX52 303 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 U3KQK5 164 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 TNCP24821 2201 aa11.78□□□□□ -0.52
COL1A1-203ENST00000471344 MSGN1A6NI15 193 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 SCGNO76038 276 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 SAA1P0DJI8 122 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-203ENST00000471344 CD40LGP29965 261 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 GNG2P59768 71 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 UBE2KP61086 200 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 NCS1P62166 190 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 PITPNAQ00169 270 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 CBX3Q13185 183 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 DYRK1AQ13627 763 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 TNXAQ16473 311 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 PRSS8Q16651 343 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 OVCH2Q7RTZ1 564 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 ZNF645Q8N7E2 425 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 VCX3AQ9NNX9 186 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 COA4Q9NYJ1 87 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 OR2W1Q9Y3N9 320 aa11.77□□□□□ -0.53
COL1A1-203ENST00000471344 C13orf42A0A1B0GVH6 325 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 FCGR3BO75015 233 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 TUSC2O75896 110 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 HLA-DQB1P01920 261 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 PRH1P02810 166 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 FCER2P06734 321 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 GP9P14770 177 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 RPS19P39019 145 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms