RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 XRCC3O43542 346 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 SLC22A5O76082 557 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 CRYZL1O95825 349 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 IGLV2-23P01705 113 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 VBP1P61758 197 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 NCS1P62166 190 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 FXYD3Q14802 87 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 ACTBL2Q562R1 376 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 OR11H1Q8NG94 326 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 OR13F1Q8NGS4 319 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 GRPEL2Q8TAA5 225 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 MRAPQ8TCY5 172 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 MYOZ3Q8TDC0 251 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 CASTOR1Q8WTX7 329 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 ARPC1AQ92747 370 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 DPF1Q92782 380 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 UBE2E2Q96LR5 201 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 GNB4Q9HAV0 340 aa12.23□□□□□ -0.45
HDAC6-218ENST00000470942 IGKV1D-13A0A0B4J2D9 117 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 MEIS3P1A6NDR6 274 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 SOX15O60248 233 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 IGKV1-13P0DP09 117 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 CD40LGP29965 261 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 HOXD3P31249 432 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-218ENST00000470942 CBX5P45973 191 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 PJVKQ0ZLH3 352 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 KIAA0141Q14154 515 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-218ENST00000470942 VMA21Q3ZAQ7 101 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 AKIRIN2Q53H80 203 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 C19orf54Q5BKX5 351 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 DDB2Q92466 427 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 SLC25A46Q96AG3 418 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 DCUN1D5Q9BTE7 237 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 IFT46Q9NQC8 304 aa12.22□□□□□ -0.45
HDAC6-218ENST00000470942 RBMX2Q9Y388 322 aaKnown RBP12.22□□□□□ -0.45
HDAC6-218ENST00000470942 SRRM4A7MD48 611 aaKnown RBP12.21□□□□□ -0.45
HDAC6-218ENST00000470942 ARPC1BO15143 372 aaKnown RBP12.21□□□□□ -0.45
HDAC6-218ENST00000470942 FCGR3BO75015 233 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 CRYGBP07316 175 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 FCGR2CP31995 323 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 OR2B11Q5JQS5 317 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 TMEM69Q5SWH9 247 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 KCTD9Q7L273 389 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 OR5M8Q8NGP6 311 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 OR1N2Q8NGR9 330 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 KCTD12Q96CX2 325 aaKnown RBP12.21□□□□□ -0.45
HDAC6-218ENST00000470942 MS4A10Q96PG2 267 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 COMMD3Q9UBI1 195 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.45
HDAC6-218ENST00000470942 I3L521 148 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 SMIM18P0DKX4 95 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 AADACP22760 399 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 TAS2R20P59543 309 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 KRTAP10-11P60412 298 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
HDAC6-218ENST00000470942 PYHIN1Q6K0P9 492 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 TEX45Q8NA69 505 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 OSR1Q8TAX0 266 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-218ENST00000470942 SECTM1Q8WVN6 248 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 TCTEX1D2Q8WW35 142 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 ZNF355PQ9NSJ1 428 aa12.2□□□□□ -0.46
HDAC6-218ENST00000470942 MRPS7Q9Y2R9 242 aaKnown RBP12.2□□□□□ -0.46
HDAC6-218ENST00000470942 IGLV2-14P01704 120 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 TPPP2P59282 170 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 UBE2KP61086 200 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 RUNX1Q01196 453 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 IDO2Q6ZQW0 420 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 OR5T1Q8NG75 326 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 OR5AP2Q8NGF4 316 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 SNAPC3Q92966 411 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 PHB2Q99623 299 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 HSD17B10Q99714 261 aaKnown RBP12.19□□□□□ -0.46
HDAC6-218ENST00000470942 NAA50Q9GZZ1 169 aaKnown RBP12.19□□□□□ -0.46
HDAC6-218ENST00000470942 ALX4Q9H161 411 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-218ENST00000470942 CCL28Q9NRJ3 127 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 TAS2R8Q9NYW2 309 aa12.19□□□□□ -0.46
HDAC6-218ENST00000470942 SMIM31A0A1B0GVY4 71 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 PPYP01298 95 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 IGHV3-11P01762 117 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 TRGV3P03979 118 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 EIF4EP06730 217 aaKnown RBP12.18□□□□□ -0.46
HDAC6-218ENST00000470942 OR8U8P0C7N1 319 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 PRSS3P35030 304 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 RORCP51449 518 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 FXYD4P59646 89 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 SSBP2P81877 361 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-218ENST00000470942 ZNF616Q08AN1 781 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 FHL3Q13643 280 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 CDK10Q15131 360 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 TNXAQ16473 311 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 ANKRD13BQ86YJ7 626 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 MFSD4AQ8N468 514 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 ACOT12Q8WYK0 555 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 MRPS26Q9BYN8 205 aaKnown RBP12.18□□□□□ -0.46
HDAC6-218ENST00000470942 SLC5A7Q9GZV3 580 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 SLA2Q9H6Q3 261 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 TNCP24821 2201 aa12.18□□□□□ -0.46
HDAC6-218ENST00000470942 TNFSF12O43508 249 aa12.17□□□□□ -0.46
HDAC6-218ENST00000470942 EGFEM1PQ0D2K5 195 aa12.17□□□□□ -0.46
HDAC6-218ENST00000470942 PRSS8Q16651 343 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms