RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PSMG3Q9BT73 122 aaPredicted RBP6.72□□□□□ -1.33
TPM3-215ENST00000469717 HEATR1Q9H583 2144 aaKnown RBP6.72□□□□□ -1.33
TPM3-215ENST00000469717 TMEM250H0YL14 139 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 WDR1O75083 606 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 LINC00205P59089 165 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 SERF2P84101 59 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 MRPL49Q13405 166 aaKnown RBP6.72□□□□□ -1.33
TPM3-215ENST00000469717 LHFPL2Q6ZUX7 228 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 Q8N976 141 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 PSMF1Q92530 271 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 ZDHHC16Q969W1 377 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 NEIL1Q96FI4 390 aaPredicted RBP6.72□□□□□ -1.33
TPM3-215ENST00000469717 CFAP47Q6ZTR5 3102 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 YLPM1P49750 1951 aaKnown RBP6.72□□□□□ -1.33
TPM3-215ENST00000469717 LOC105371242A0A075B767 164 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 TUSC2O75896 110 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 TDGF1P13385 188 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 GLB1P16278 677 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 SRP14P37108 136 aaKnown RBP6.72□□□□□ -1.33
TPM3-215ENST00000469717 GPM6AP51674 278 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 NXPH1P58417 271 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 SPATA45Q537H7 98 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 BAGE3Q86Y29 109 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 BAGE2Q86Y30 109 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 RCHY1Q96PM5 261 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 PTPN13Q12923 2485 aa6.72□□□□□ -1.33
TPM3-215ENST00000469717 COL5A1P20908 1838 aaPredicted RBP6.71□□□□□ -1.33
TPM3-215ENST00000469717 LOC102725191A0A1B0GVB3 256 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 TLX3O43711 291 aaPredicted RBP6.71□□□□□ -1.33
TPM3-215ENST00000469717 SYNGR3O43761 229 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 TIAF1O95411 115 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 IGHEP01854 428 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 CRISP2P16562 243 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 PMCHP20382 165 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 DCAF12Q5T6F0 453 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 C9orf135Q5VTT2 229 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 ASCL4Q6XD76 172 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 Q6ZN92 141 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 TMEM105Q8N8V8 129 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 OR5AU1Q8NGC0 362 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 KCNS2Q9ULS6 477 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 SELENOKQ9Y6D0 94 aa6.71□□□□□ -1.33
TPM3-215ENST00000469717 NPIPA3F8WFD2 350 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 MLNRO43193 412 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 TNFSF15O95150 251 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 IGLV2-14P01704 120 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 TPPP2P59282 170 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 HBG1P69891 147 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 HBG2P69892 147 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 ODF1Q14990 250 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 MSMO1Q15800 293 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 ZNF585BQ52M93 769 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 LCN12Q6JVE5 192 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 FAM19A2Q8N3H0 131 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 ABHD14BQ96IU4 210 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 AKIRIN1Q9H9L7 192 aaPredicted RBP6.71□□□□□ -1.34
TPM3-215ENST00000469717 ANKRD11Q6UB99 2663 aaPredicted RBP6.71□□□□□ -1.34
TPM3-215ENST00000469717 SYNGR1O43759 233 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 IER3P46695 156 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 ZIC4Q8N9L1 334 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
TPM3-215ENST00000469717 MTCH1Q9NZJ7 389 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 PKDREJQ9NTG1 2253 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 LOC400499M0QZD8 3231 aa6.71□□□□□ -1.34
TPM3-215ENST00000469717 CTXND1A0A1B0GTU2 59 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 hCG_38984A0A1B0GV85 526 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 DIRC3C9JPN6 131 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 TNFSF11O14788 317 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 RAMP3O60896 148 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 HYPMO75409 117 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 FASLGP48023 281 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 CCL11P51671 97 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 HTD2P86397 168 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 RAET1LQ5VY80 246 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 LEMD1Q68G75 181 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 NFAM1Q8NET5 270 aaPredicted RBP6.7□□□□□ -1.34
TPM3-215ENST00000469717 OR1F12Q8NHA8 337 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 SFRP2Q96HF1 295 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 RBM7Q9Y580 266 aaKnown RBP6.7□□□□□ -1.34
TPM3-215ENST00000469717 SCO2A0A1W2PP80 73 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 KRASP01116 189 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 EPHA8P29322 1005 aaPredicted RBP6.7□□□□□ -1.34
TPM3-215ENST00000469717 HOXA4Q00056 320 aaPredicted RBP6.7□□□□□ -1.34
TPM3-215ENST00000469717 PSG7Q13046 419 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 RNPS1Q15287 305 aaKnown RBP6.7□□□□□ -1.34
TPM3-215ENST00000469717 TMEM42Q69YG0 159 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 ANKRD37Q7Z713 158 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 APH1AQ96BI3 265 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 PINX1Q96BK5 328 aaKnown RBP6.7□□□□□ -1.34
TPM3-215ENST00000469717 ZC2HC1AQ96GY0 325 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 VPS25Q9BRG1 176 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 CLEC5AQ9NY25 188 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 C19orf25Q9UFG5 118 aaPredicted RBP6.7□□□□□ -1.34
TPM3-215ENST00000469717 LAMTOR2Q9Y2Q5 125 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 TBL2Q9Y4P3 447 aaKnown RBP6.7□□□□□ -1.34
TPM3-215ENST00000469717 MUC3AQ02505 3323 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 A0A1B0GX78 115 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 CLDN14O95500 239 aa6.7□□□□□ -1.34
TPM3-215ENST00000469717 FOLR3P41439 243 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms