RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 DYNAPQ8N1N2 210 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 PIFOQ8TCI5 191 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 CITED1Q99966 193 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 SULT4A1Q9BR01 284 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 SLC25A32Q9H2D1 315 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 OR6C3Q9NZP0 311 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 IGKV1D-8A0A087WSZ0 117 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 RNF222A6NCQ9 220 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 ZNF729A6NN14 1252 aaPredicted RBP11.67□□□□□ -0.54
COL27A1-203ENST00000468565 PDCD6O75340 191 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 MMP23AO75900 390 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 OR5H8P0DN80 308 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 PAX6P26367 422 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 DYNLT3P51808 116 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 RBM11P57052 281 aaKnown RBP11.67□□□□□ -0.54
COL27A1-203ENST00000468565 LY6EQ16553 131 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 ANKRD55Q3KP44 614 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 PIGYQ3MUY2 71 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 LDLRAD2Q5SZI1 272 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 LINC00596Q86U02 117 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 TRRAPQ9Y4A5 3859 aa11.67□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A10PA6NDY2 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A18PA6NE21 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A16PA6NEW6 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A20PA6NIJ5 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A7PA6NKC0 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A22PA8MWA6 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A12PA8MX19 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A5PA8MXJ8 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A23PA8MXZ1 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A15PP0C7V4 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A13PP0C7W8 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A14PP0C7W9 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FAM90A24PP0C7X0 464 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 NUP62P37198 522 aaPredicted RBP11.66□□□□□ -0.54
COL27A1-203ENST00000468565 PRAMEF5Q5TYX0 476 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 SGPP2Q8IWX5 399 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 DCUN1D4Q92564 292 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 PHYHIPLQ96FC7 376 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 C2orf50Q96LR7 162 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 ZNF471Q9BX82 626 aaPredicted RBP11.66□□□□□ -0.54
COL27A1-203ENST00000468565 ZNF286AQ9HBT8 521 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 SDHAF2Q9NX18 166 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 A0A087X0M5 115 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 TRBV6-7A0A0A0MS04 114 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 A0A1B0GX30 115 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 HSPB6O14558 160 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 RLN2P04090 185 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 PET100P0DJ07 73 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 FUT3P21217 361 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 SSX2Q16385 188 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 ABHD12Q8N2K0 398 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 ZNF596Q8TC21 504 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 CXorf58Q96LI9 332 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 TCF19Q9Y242 345 aa11.66□□□□□ -0.54
COL27A1-203ENST00000468565 TEX13DA0A0J9YY54 714 aaPredicted RBP11.65□□□□□ -0.54
COL27A1-203ENST00000468565 MFSD2BA6NFX1 497 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 ADAP1O75689 374 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 CGB3P0DN86 165 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 CGB7P0DN87 165 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 HTR1DP28221 377 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 KIR2DS4P43632 304 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 LUMP51884 338 aaPredicted RBP11.65□□□□□ -0.54
COL27A1-203ENST00000468565 C17orf58Q2M2W7 97 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 MPV17LQ2QL34 196 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 DHRS11Q6UWP2 260 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 LINC00518Q8N0U6 118 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 ZNF565Q8N9K5 539 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 OR4P4Q8NGL7 312 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 OR4C13Q8NGP0 309 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 PITPNC1Q9UKF7 332 aa11.65□□□□□ -0.54
COL27A1-203ENST00000468565 MGAM2Q2M2H8 2515 aa11.65□□□□□ -0.55
COL27A1-203ENST00000468565 KBTBD11-OT1A0A1B0GTJ5 212 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 KRTAP10-3P60369 221 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 PRSS54Q6PEW0 395 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 SUMF2Q8NBJ7 301 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 NPFFR1Q9GZQ6 430 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 LINC00574Q9H8X3 128 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 PRR13Q9NZ81 148 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 ZNF581Q9P0T4 197 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 CRYM-AS1A6NIL9 109 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 CHST1O43916 411 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 OR7C1O76099 320 aaPredicted RBP11.64□□□□□ -0.55
COL27A1-203ENST00000468565 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 LYL1P12980 280 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 GLP1RP43220 463 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 ABCA11PQ4W5N1 156 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 OR13A1Q8NGR1 328 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 PLPPR1Q8TBJ4 325 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 RNF126Q9BV68 326 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 DPM3Q9P2X0 92 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
COL27A1-203ENST00000468565 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
COL27A1-203ENST00000468565 A6NDX4 124 aa11.63□□□□□ -0.55
COL27A1-203ENST00000468565 IFNA21P01568 189 aa11.63□□□□□ -0.55
COL27A1-203ENST00000468565 RAB13P51153 203 aa11.63□□□□□ -0.55
COL27A1-203ENST00000468565 HSD17B13Q7Z5P4 300 aaPredicted RBP11.63□□□□□ -0.55
COL27A1-203ENST00000468565 OR1S1Q8NH92 325 aa11.63□□□□□ -0.55
COL27A1-203ENST00000468565 KIRREL1Q96J84 757 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms