RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TRAV18A0A075B6X5 111 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 H7C2Y5 167 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 FCN1O00602 326 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 ATP6V0E1O15342 81 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 XRCC3O43542 346 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 HLA-DQB1P01920 261 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 CRYGBP07316 175 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 CDX1P47902 265 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-205ENST00000468338 THBS3P49746 956 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 LSM3P62310 102 aaKnown RBP8.71□□□□□ -1.02
COL4A6-205ENST00000468338 CX3CL1P78423 397 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 NDPQ00604 133 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 KIAA0141Q14154 515 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-205ENST00000468338 PSG5Q15238 335 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 PDLIM3Q53GG5 364 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-205ENST00000468338 C18orf65Q6ZTR6 163 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 C1QL4Q86Z23 238 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 LINC00482Q8N8I6 264 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 MINDY2Q8NBR6 621 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 SLC25A46Q96AG3 418 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 P2RX4Q99571 388 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 GINS4Q9BRT9 223 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 FBXL15Q9H469 300 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 DIABLOQ9NR28 239 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 FBXO7Q9Y3I1 522 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 OR2W1Q9Y3N9 320 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 NUBP2Q9Y5Y2 271 aa8.71□□□□□ -1.02
COL4A6-205ENST00000468338 G3V318 75 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 IGLV2-14P01704 120 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 IGLV2-23P01705 113 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 APOA2P02652 100 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 EGR2P11161 476 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-205ENST00000468338 VDAC1P21796 283 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 DUTP33316 252 aaKnown RBP8.7□□□□□ -1.02
COL4A6-205ENST00000468338 MYCNOSP40205 109 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 LGALS7P47929 136 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 NCS1P62166 190 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 SSBP2P81877 361 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-205ENST00000468338 CXorf66Q5JRM2 361 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-205ENST00000468338 KHDC1LQ5JSQ8 128 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 ZNF562Q6V9R5 426 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 HOGA1Q86XE5 327 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 ANKRD13BQ86YJ7 626 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 ZNF695Q8IW36 515 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 FLYWCH2Q96CP2 140 aaKnown RBP8.7□□□□□ -1.02
COL4A6-205ENST00000468338 ADTRPQ96IZ2 230 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 CMTM3Q96MX0 182 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 TSNAXQ99598 290 aaKnown RBP8.7□□□□□ -1.02
COL4A6-205ENST00000468338 SLC35D1Q9NTN3 355 aa8.7□□□□□ -1.02
COL4A6-205ENST00000468338 DNAH3Q8TD57 4116 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 TRAV41A0A0B4J266 112 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 IGKV1D-13A0A0B4J2D9 117 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 SRRM4A7MD48 611 aaKnown RBP8.69□□□□□ -1.02
COL4A6-205ENST00000468338 LINC00473A8K010 186 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 SLC22A5O76082 557 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 GABARAPO95166 117 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 IGKV1-13P0DP09 117 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 RRASP10301 218 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 NFYAP23511 347 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-205ENST00000468338 ALDH3B2P48448 385 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 RPS16P62249 146 aaKnown RBP8.69□□□□□ -1.02
COL4A6-205ENST00000468338 EIF4EBP1Q13541 118 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-205ENST00000468338 CTF1Q16619 201 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 UBE2NLQ5JXB2 153 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 LCNL1Q6ZST4 164 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 ZNF645Q8N7E2 425 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 GVQW1Q8N7I0 195 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 TCTEX1D1Q8N7M0 179 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 STPG3Q8N7X2 389 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 BEST4Q8NFU0 473 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 S100A16Q96FQ6 103 aaKnown RBP8.69□□□□□ -1.02
COL4A6-205ENST00000468338 KLK15Q9H2R5 256 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 ANAPC10Q9UM13 185 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 WSB1Q9Y6I7 421 aa8.69□□□□□ -1.02
COL4A6-205ENST00000468338 SOX15O60248 233 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 DUS4LO95620 317 aaKnown RBP8.68□□□□□ -1.02
COL4A6-205ENST00000468338 PTHLHP12272 177 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 CBX5P45973 191 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 LUMP51884 338 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-205ENST00000468338 VBP1P61758 197 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 CD69Q07108 199 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 MSMO1Q15800 293 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 MRGPRG-AS1Q2M3A8 158 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 AKIRIN2Q53H80 203 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 PPP1R27Q86WC6 154 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 SAMD12Q8N8I0 201 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 KLHL30-AS1Q8NEE0 82 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 SNAPC3Q92966 411 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 UBE2E2Q96LR5 201 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 PARP11Q9NR21 331 aa8.68□□□□□ -1.02
COL4A6-205ENST00000468338 METTL1Q9UBP6 276 aaKnown RBP8.68□□□□□ -1.02
COL4A6-205ENST00000468338 RBMX2Q9Y388 322 aaKnown RBP8.68□□□□□ -1.02
COL4A6-205ENST00000468338 RBM7Q9Y580 266 aaKnown RBP8.68□□□□□ -1.02
COL4A6-205ENST00000468338 CCL24O00175 119 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 ARPC1BO15143 372 aaKnown RBP8.67□□□□□ -1.02
COL4A6-205ENST00000468338 SLC25A17O43808 307 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 LY86O95711 162 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 CA2P00918 260 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 APOA1P02647 267 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 IGLL1P15814 213 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms