RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TRAV18A0A075B6X5 111 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 A0A0A6YYH2 397 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 A6NJ64 397 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 ARPC1BO15143 372 aaKnown RBP13.27□□□□□ -0.29
SSBP1-207ENST00000468267 AIREO43918 545 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 HLA-DQB1P01920 261 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 NFYAP23511 347 aaPredicted RBP13.27□□□□□ -0.29
SSBP1-207ENST00000468267 GNB1P62873 340 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 PJVKQ0ZLH3 352 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 FXYD3Q14802 87 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 PYHIN1Q6K0P9 492 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 ARPC1AQ92747 370 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 HARBI1Q96MB7 349 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 OR5B12Q96R08 314 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 ANXA10Q9UJ72 324 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 SPATA2Q9UM82 520 aa13.27□□□□□ -0.29
SSBP1-207ENST00000468267 SRRM4A7MD48 611 aaKnown RBP13.26□□□□□ -0.29
SSBP1-207ENST00000468267 LINC00473A8K010 186 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 J3QRK9 145 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 SHOXO15266 292 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 TGFBR1P36897 503 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 LUMP51884 338 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-207ENST00000468267 SSBP2P81877 361 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-207ENST00000468267 ZNF616Q08AN1 781 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 ASPHD1Q5U4P2 390 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 CROCCP3Q8IVE0 287 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 ZNF645Q8N7E2 425 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 CASTOR1Q8WTX7 329 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 DIABLOQ9NR28 239 aa13.26□□□□□ -0.29
SSBP1-207ENST00000468267 ZMAT5Q9UDW3 170 aaKnown RBP13.26□□□□□ -0.29
SSBP1-207ENST00000468267 SLC22A5O76082 557 aa13.25□□□□□ -0.29
SSBP1-207ENST00000468267 CNIH1O95406 144 aa13.25□□□□□ -0.29
SSBP1-207ENST00000468267 OR8U8P0C7N1 319 aa13.25□□□□□ -0.29
SSBP1-207ENST00000468267 RPS19P39019 145 aaKnown RBP13.25□□□□□ -0.29
SSBP1-207ENST00000468267 C9orf66Q5T8R8 295 aa13.25□□□□□ -0.29
SSBP1-207ENST00000468267 GRPEL2Q8TAA5 225 aa13.25□□□□□ -0.29
SSBP1-207ENST00000468267 AUNIPQ9H7T9 357 aa13.25□□□□□ -0.29
SSBP1-207ENST00000468267 IGKV1D-13A0A0B4J2D9 117 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 TRIM64CA6NLI5 447 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 SEC14L6B5MCN3 397 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 TUSC2O75896 110 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 CRYZL1O95825 349 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 IGLV2-14P01704 120 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 IGKV1-13P0DP09 117 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 CD40LGP29965 261 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 DGCR2P98153 550 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 MRGPRG-AS1Q2M3A8 158 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 HOGA1Q86XE5 327 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 GVQW1Q8N7I0 195 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 TEX45Q8NA69 505 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 BEST4Q8NFU0 473 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 MS4A10Q96PG2 267 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 ALX4Q9H161 411 aaPredicted RBP13.24□□□□□ -0.29
SSBP1-207ENST00000468267 SCOCQ9UIL1 159 aa13.24□□□□□ -0.29
SSBP1-207ENST00000468267 RBMX2Q9Y388 322 aaKnown RBP13.24□□□□□ -0.29
SSBP1-207ENST00000468267 LGALS1P09382 135 aaKnown RBP13.23□□□□□ -0.29
SSBP1-207ENST00000468267 UBE2KP61086 200 aa13.23□□□□□ -0.29
SSBP1-207ENST00000468267 LSM3P62310 102 aaKnown RBP13.23□□□□□ -0.29
SSBP1-207ENST00000468267 VMA21Q3ZAQ7 101 aa13.23□□□□□ -0.29
SSBP1-207ENST00000468267 DEFB121Q5J5C9 76 aa13.23□□□□□ -0.29
SSBP1-207ENST00000468267 OSR1Q8TAX0 266 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-207ENST00000468267 SLA2Q9H6Q3 261 aa13.23□□□□□ -0.29
SSBP1-207ENST00000468267 XRCC3O43542 346 aa13.22□□□□□ -0.29
SSBP1-207ENST00000468267 RAMP3O60896 148 aa13.22□□□□□ -0.29
SSBP1-207ENST00000468267 TPPP2P59282 170 aa13.22□□□□□ -0.29
SSBP1-207ENST00000468267 ARPC4P59998 168 aa13.22□□□□□ -0.29
SSBP1-207ENST00000468267 RPL30P62888 115 aaKnown RBP13.22□□□□□ -0.29
SSBP1-207ENST00000468267 OR5T1Q8NG75 326 aa13.22□□□□□ -0.29
SSBP1-207ENST00000468267 S100A16Q96FQ6 103 aaKnown RBP13.22□□□□□ -0.29
SSBP1-207ENST00000468267 RHOVQ96L33 236 aa13.22□□□□□ -0.29
SSBP1-207ENST00000468267 TMEM68Q96MH6 324 aa13.22□□□□□ -0.29
SSBP1-207ENST00000468267 PRELID3BQ9Y3B1 194 aa13.22□□□□□ -0.29
SSBP1-207ENST00000468267 LINC01619G3V211 115 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 H3BUA1 57 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 FCGR3BO75015 233 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 IGHV3-11P01762 117 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 TRGV3P03979 118 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 PTHLHP12272 177 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 CBX5P45973 191 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 EIF4EBP1Q13541 118 aaPredicted RBP13.21□□□□□ -0.29
SSBP1-207ENST00000468267 PRSS8Q16651 343 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 UBE2NLQ5JXB2 153 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 KCTD9Q7L273 389 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 OVCH2Q7RTZ1 564 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 POC5Q8NA72 575 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 DCUN1D4Q92564 292 aa13.21□□□□□ -0.29
SSBP1-207ENST00000468267 HSD17B10Q99714 261 aaKnown RBP13.21□□□□□ -0.29
SSBP1-207ENST00000468267 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 A0A087WW49 117 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 HSPB1P04792 205 aaKnown RBP13.2□□□□□ -0.3
SSBP1-207ENST00000468267 AADACP22760 399 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 FCGR2CP31995 323 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 INSL3P51460 131 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 IDO2Q6ZQW0 420 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 SAMD12Q8N8I0 201 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 SNAPC3Q92966 411 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 DLX4Q92988 240 aaPredicted RBP13.2□□□□□ -0.3
SSBP1-207ENST00000468267 SLC25A46Q96AG3 418 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 DCUN1D5Q9BTE7 237 aa13.2□□□□□ -0.3
SSBP1-207ENST00000468267 FUNDC2Q9BWH2 189 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms