RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 C6orf62Q9GZU0 229 aaPredicted RBP15.77■□□□□ 0.12
NPHP4-206ENST00000468253 MMP27Q9H306 513 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 FBXL15Q9H469 300 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 CCL28Q9NRJ3 127 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 KLK11Q9UBX7 282 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 NBEAL1Q6ZS30 2694 aa15.76■□□□□ 0.11
NPHP4-206ENST00000468253 IGLV2-23P01705 113 aa15.76■□□□□ 0.11
NPHP4-206ENST00000468253 CRYGBP07316 175 aa15.76■□□□□ 0.11
NPHP4-206ENST00000468253 TBPP20226 339 aa15.76■□□□□ 0.11
NPHP4-206ENST00000468253 HERV-K104P61576 105 aa15.76■□□□□ 0.11
NPHP4-206ENST00000468253 RPL30P62888 115 aaKnown RBP15.76■□□□□ 0.11
NPHP4-206ENST00000468253 CX3CL1P78423 397 aa15.76■□□□□ 0.11
NPHP4-206ENST00000468253 TEX38Q6PEX7 206 aa15.76■□□□□ 0.11
NPHP4-206ENST00000468253 ZNF2Q9BSG1 426 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-206ENST00000468253 ZFP57Q9NU63 452 aa15.76■□□□□ 0.11
NPHP4-206ENST00000468253 METTL1Q9UBP6 276 aaKnown RBP15.76■□□□□ 0.11
NPHP4-206ENST00000468253 TSSC4Q9Y5U2 329 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-206ENST00000468253 VWFP04275 2813 aa15.76■□□□□ 0.11
NPHP4-206ENST00000468253 FBN3Q75N90 2809 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 TCRBV4S1A1TA0A5B7 111 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 SRRM4A7MD48 611 aaKnown RBP15.75■□□□□ 0.11
NPHP4-206ENST00000468253 FCN1O00602 326 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 SHOXO15266 292 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 CSF1P09603 554 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 GNRHRP30968 328 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 TNFSF8P32971 234 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 KIR2DS2P43631 304 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 CRIP2P52943 208 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-206ENST00000468253 PLGLAQ15195 96 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 LPCAT3Q6P1A2 487 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 KCTD9Q7L273 389 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 ZNF329Q86UD4 541 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 TEX45Q8NA69 505 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 LINC00527Q9UJ94 153 aa15.75■□□□□ 0.11
NPHP4-206ENST00000468253 ADARB2-AS1A8MUL3 147 aa15.74■□□□□ 0.11
NPHP4-206ENST00000468253 UCP3P55916 312 aa15.74■□□□□ 0.11
NPHP4-206ENST00000468253 TSPAN5P62079 268 aa15.74■□□□□ 0.11
NPHP4-206ENST00000468253 CFHR3Q02985 330 aa15.74■□□□□ 0.11
NPHP4-206ENST00000468253 TREML4Q6UXN2 200 aa15.74■□□□□ 0.11
NPHP4-206ENST00000468253 PPP1R27Q86WC6 154 aa15.74■□□□□ 0.11
NPHP4-206ENST00000468253 RNF152Q8N8N0 203 aa15.74■□□□□ 0.11
NPHP4-206ENST00000468253 TMEM229BQ8NBD8 167 aa15.74■□□□□ 0.11
NPHP4-206ENST00000468253 HARBI1Q96MB7 349 aa15.74■□□□□ 0.11
NPHP4-206ENST00000468253 RBFOX2O43251 390 aaKnown RBP eCLIP15.73■□□□□ 0.115e-8■■■■■ 28.4
NPHP4-206ENST00000468253 SLC25A17O43808 307 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 FCGR3BO75015 233 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 CRYZL1O95825 349 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 IGHG4P01861 327 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 ELANEP08246 267 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 VDAC1P21796 283 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 BRWD1-AS2P59051 145 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 FXYD4P59646 89 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 UBE2KP61086 200 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 TMEM267Q0VDI3 215 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-206ENST00000468253 FOXE3Q13461 319 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 C10orf99Q6UWK7 81 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 TMEM17Q86X19 198 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 SMIM4Q8WVI0 70 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 TCTEX1D2Q8WW35 142 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 AIFM2Q9BRQ8 373 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 TAS2R8Q9NYW2 309 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 NUBP2Q9Y5Y2 271 aa15.73■□□□□ 0.11
NPHP4-206ENST00000468253 FABP12A6NFH5 140 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 GSTZ1O43708 216 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-206ENST00000468253 CD74P04233 296 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 IFNA6P05013 189 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 PPIFP30405 207 aaKnown RBP15.72■□□□□ 0.11
NPHP4-206ENST00000468253 SLC6A1P30531 599 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 IL18Q14116 193 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 VMA21Q3ZAQ7 101 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 ZNF818PQ6ZRF7 136 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 CMTM1Q8IZ96 169 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 ARRDC1Q8N5I2 433 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 TCTEX1D1Q8N7M0 179 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 MINDY2Q8NBR6 621 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 OR4F17Q8NGA8 305 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 OR4S2Q8NH73 311 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 CD300LFQ8TDQ1 290 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 OR4F4Q96R69 305 aa15.72■□□□□ 0.11
NPHP4-206ENST00000468253 CD3DP04234 171 aa15.71■□□□□ 0.11
NPHP4-206ENST00000468253 EGR2P11161 476 aaPredicted RBP15.71■□□□□ 0.11
NPHP4-206ENST00000468253 TAS2R19P59542 299 aa15.71■□□□□ 0.11
NPHP4-206ENST00000468253 DGCR2P98153 550 aa15.71■□□□□ 0.11
NPHP4-206ENST00000468253 CATR1Q13166 79 aa15.71■□□□□ 0.11
NPHP4-206ENST00000468253 NSUN5P1Q3KNT7 163 aa15.71■□□□□ 0.11
NPHP4-206ENST00000468253 AKIRIN2Q53H80 203 aa15.71■□□□□ 0.11
NPHP4-206ENST00000468253 RNASE10Q5GAN6 216 aaKnown RBP15.71■□□□□ 0.11
NPHP4-206ENST00000468253 DCUN1D5Q9BTE7 237 aa15.71■□□□□ 0.11
NPHP4-206ENST00000468253 TRAV41A0A0B4J266 112 aa15.7■□□□□ 0.1
NPHP4-206ENST00000468253 GPR31O00270 319 aa15.7■□□□□ 0.1
NPHP4-206ENST00000468253 ATP6V0E1O15342 81 aa15.7■□□□□ 0.1
NPHP4-206ENST00000468253 PGLYRP1O75594 196 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-206ENST00000468253 PTBP1P26599 531 aaKnown RBP eCLIP15.7■□□□□ 0.1
NPHP4-206ENST00000468253 S100A5P33763 92 aa15.7■□□□□ 0.1
NPHP4-206ENST00000468253 C19orf54Q5BKX5 351 aa15.7■□□□□ 0.1
NPHP4-206ENST00000468253 TMEM68Q96MH6 324 aa15.7■□□□□ 0.1
NPHP4-206ENST00000468253 CLCC1Q96S66 551 aa15.7■□□□□ 0.1
NPHP4-206ENST00000468253 PARP11Q9NR21 331 aa15.7■□□□□ 0.1
NPHP4-206ENST00000468253 WSB1Q9Y6I7 421 aa15.7■□□□□ 0.1
NPHP4-206ENST00000468253 CA2P00918 260 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms