RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CD1BP29016 333 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 MYPOPQ86VE0 399 aaPredicted RBP16.54■□□□□ 0.24
SDF4-205ENST00000465727 ZDHHC16Q969W1 377 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 SAMD10Q9BYL1 202 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 KCNIP1Q9NZI2 227 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 LY96Q9Y6Y9 160 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 PGPEP1LA6NFU8 196 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 SIRPB1O00241 398 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 TRAPPC6AO75865 159 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 MMP23AO75900 390 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 S1PR2O95136 353 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 RFPL3SP0C7P2 107 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 DEFA4P12838 97 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 CBLN1P23435 193 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 CDKN1AP38936 164 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 PLP2Q04941 152 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 ZNF816Q0VGE8 651 aaPredicted RBP16.54■□□□□ 0.24
SDF4-205ENST00000465727 OR5I1Q13606 314 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 H2BFWTQ7Z2G1 175 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 BAGE3Q86Y29 109 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 BAGE2Q86Y30 109 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 WDR31Q8NA23 367 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 RNF2Q99496 336 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 OPN3Q9H1Y3 402 aaPredicted RBP16.54■□□□□ 0.24
SDF4-205ENST00000465727 OR2D2Q9H210 308 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 POLDIP2Q9Y2S7 368 aa16.54■□□□□ 0.24
SDF4-205ENST00000465727 TRAV38-1A0A0B4J264 116 aa16.53■□□□□ 0.24
SDF4-205ENST00000465727 CXorf1O96002 111 aa16.53■□□□□ 0.24
SDF4-205ENST00000465727 SELEP16581 610 aa16.53■□□□□ 0.24
SDF4-205ENST00000465727 CD33P20138 364 aa16.53■□□□□ 0.24
SDF4-205ENST00000465727 OPRK1P41145 380 aa16.53■□□□□ 0.24
SDF4-205ENST00000465727 COMPP49747 757 aaPredicted RBP16.53■□□□□ 0.24
SDF4-205ENST00000465727 GFRA1P56159 465 aa16.53■□□□□ 0.24
SDF4-205ENST00000465727 HLA-BQ31612 363 aa16.53■□□□□ 0.24
SDF4-205ENST00000465727 OR2Y1Q8NGV0 311 aa16.53■□□□□ 0.24
SDF4-205ENST00000465727 LY6G6EA0A0G2JKS1 128 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 A8MXE2 369 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 WISP2O76076 250 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 STAG3L2P0CL84 134 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 STAG3L3P0CL85 134 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 RPL19P84098 196 aaKnown RBP16.52■□□□□ 0.24
SDF4-205ENST00000465727 OCC1Q8TAD7 63 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 GALMQ96C23 342 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 TAAR6Q96RI8 345 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 ZNF586Q9NXT0 402 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 U3KQA8 63 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 ESPL1Q14674 2120 aa16.52■□□□□ 0.24
SDF4-205ENST00000465727 C15orf62A8K5M9 175 aa16.52■□□□□ 0.23
SDF4-205ENST00000465727 SH2D1BO14796 132 aa16.52■□□□□ 0.23
SDF4-205ENST00000465727 PCP4P48539 62 aa16.52■□□□□ 0.23
SDF4-205ENST00000465727 ERVK11-1P61568 191 aa16.52■□□□□ 0.23
SDF4-205ENST00000465727 RPL30P62888 115 aaKnown RBP16.52■□□□□ 0.23
SDF4-205ENST00000465727 ZNF146Q15072 292 aa16.52■□□□□ 0.23
SDF4-205ENST00000465727 SIGLECL1Q8N7X8 197 aa16.52■□□□□ 0.23
SDF4-205ENST00000465727 RTL8AQ9BWD3 113 aa16.52■□□□□ 0.23
SDF4-205ENST00000465727 ZNF503-AS2A6NEH8 195 aa16.51■□□□□ 0.23
SDF4-205ENST00000465727 LGALS4P56470 323 aa16.51■□□□□ 0.23
SDF4-205ENST00000465727 RPP30P78346 268 aaKnown RBP16.51■□□□□ 0.23
SDF4-205ENST00000465727 C9orf135Q5VTT2 229 aa16.51■□□□□ 0.23
SDF4-205ENST00000465727 DMRTA1Q5VZB9 504 aa16.51■□□□□ 0.23
SDF4-205ENST00000465727 UBALD1Q8TB05 177 aa16.51■□□□□ 0.23
SDF4-205ENST00000465727 SLC35E1Q96K37 410 aa16.51■□□□□ 0.23
SDF4-205ENST00000465727 SLC45A2Q9UMX9 530 aa16.51■□□□□ 0.23
SDF4-205ENST00000465727 C9JCJ5 164 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 FCN1O00602 326 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 RBMXL2O75526 392 aaKnown RBP16.5■□□□□ 0.23
SDF4-205ENST00000465727 ARL14EPLP0DKL9 152 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 GDF1P27539 372 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 RAB7AP51149 207 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 BATFQ16520 125 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 OR1L6Q8NGR2 347 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 GNB1LQ9BYB4 327 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 ZNF703Q9H7S9 590 aaPredicted RBP16.5■□□□□ 0.23
SDF4-205ENST00000465727 MYO15AQ9UKN7 3530 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 SCO2A0A1W2PP80 73 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 MT-ND6P03923 174 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 CA6P23280 308 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 EDDM3BP56851 147 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 TGFBR3Q03167 851 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 GCSAMLQ5JQS6 135 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 TRIOO75962 3097 aa16.5■□□□□ 0.23
SDF4-205ENST00000465727 C17orf98A8MV24 154 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 SIAH2O43255 324 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 ZNHIT1O43257 154 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 NEURL1O76050 574 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 BMP5P22003 454 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 IGFBP7Q16270 282 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 RPEL1Q2QD12 228 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 COX19Q49B96 90 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 C5orf30Q96GV9 206 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 MSL2Q9HCI7 577 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 SAA2-SAA4A0A096LPE2 208 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 TMEM30CPA0ZSE6 113 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 GPX1P07203 203 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 CTRLP40313 264 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 BRWD1-AS2P59051 145 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 AARDQ4LEZ3 155 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 OR10J3Q5JRS4 329 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 FBXW9Q5XUX1 488 aa16.49■□□□□ 0.23
SDF4-205ENST00000465727 C1orf174Q8IYL3 243 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms