RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 C11orf52Q96A22 123 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 HSPB9Q9BQS6 159 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
USP48-206ENST00000464577 OR2D2Q9H210 308 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 ZNF703Q9H7S9 590 aaPredicted RBP6.11□□□□□ -1.43
USP48-206ENST00000464577 MRPS17Q9Y2R5 130 aaKnown RBP6.11□□□□□ -1.43
USP48-206ENST00000464577 UNC80Q8N2C7 3258 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 SAA2-SAA4A0A096LPE2 208 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 TMEM30CPA0ZSE6 113 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 GRIFINA4D1Z8 144 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 FAM90A9PA6NNJ1 464 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 C9JCJ5 164 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 SH2D1BO14796 132 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 STAG3L2P0CL84 134 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 STAG3L3P0CL85 134 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 CBLN1P23435 193 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 GDF1P27539 372 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 CD1BP29016 333 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 COMPP49747 757 aaPredicted RBP6.1□□□□□ -1.43
USP48-206ENST00000464577 LGALS4P56470 323 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 BRWD1-AS2P59051 145 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 IGFBP7Q16270 282 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 ZNF718Q3SXZ3 478 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 H2BFWTQ7Z2G1 175 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 QTRT1Q9BXR0 403 aaKnown RBP6.1□□□□□ -1.43
USP48-206ENST00000464577 PATZ1Q9HBE1 687 aaKnown RBP6.1□□□□□ -1.43
USP48-206ENST00000464577 AURKAIP1Q9NWT8 199 aaPredicted RBP6.1□□□□□ -1.43
USP48-206ENST00000464577 TRAV38-1A0A0B4J264 116 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 SCO2A0A1W2PP80 73 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 C17orf98A8MV24 154 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 J3QW42 95 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 NEURL1O76050 574 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 DEFA4P12838 97 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 CA6P23280 308 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 CDKN1AP38936 164 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 TMPRSS3P57727 454 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 RPP30P78346 268 aaKnown RBP6.1□□□□□ -1.43
USP48-206ENST00000464577 TGFBR3Q03167 851 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 COX19Q49B96 90 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 C9orf135Q5VTT2 229 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 MYPOPQ86VE0 399 aaPredicted RBP6.1□□□□□ -1.43
USP48-206ENST00000464577 OR1L6Q8NGR2 347 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 OCC1Q8TAD7 63 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 UBALD1Q8TB05 177 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 SAP25Q8TEE9 199 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 GALMQ96C23 342 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 RNF2Q99496 336 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 DEPPQ9NTK1 212 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 ZNF586Q9NXT0 402 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 ZFP30Q9Y2G7 519 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 PAM16Q9Y3D7 125 aa6.1□□□□□ -1.43
USP48-206ENST00000464577 CDH23Q9H251 3354 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 NCKAP5O14513 1909 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 PINLYPA6NC86 204 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 PGPEP1LA6NFU8 196 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 OOEPA6NGQ2 149 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 A8MXE2 369 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 C12orf77C9JDV5 145 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 CDIPTO14735 213 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 ZNHIT1O43257 154 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 MT-ND6P03923 174 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 ARL14EPLP0DKL9 152 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 SELEP16581 610 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 CTRLP40313 264 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 FOXG1P55316 489 aaPredicted RBP6.09□□□□□ -1.43
USP48-206ENST00000464577 RPL19P84098 196 aaKnown RBP6.09□□□□□ -1.43
USP48-206ENST00000464577 TRA2AQ13595 282 aaKnown RBP eCLIP6.09□□□□□ -1.438e-6■□□□□ 8.1
USP48-206ENST00000464577 TDRG1Q3Y452 100 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 GCSAMLQ5JQS6 135 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 SLC35E4Q6ICL7 350 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 WDR86Q86TI4 376 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 BAGE3Q86Y29 109 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 BAGE2Q86Y30 109 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 TUSC5Q8IXB3 177 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 ZNF808Q8N4W9 903 aaPredicted RBP6.09□□□□□ -1.43
USP48-206ENST00000464577 Q8N976 141 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 SCCPDHQ8NBX0 429 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 VN1R17PQ8TDU5 208 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 APH1AQ96BI3 265 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 HSD17B10Q99714 261 aaKnown RBP6.09□□□□□ -1.43
USP48-206ENST00000464577 GNB1LQ9BYB4 327 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 SAMD10Q9BYL1 202 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 GP6Q9HCN6 339 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 BOKQ9UMX3 212 aaPredicted RBP6.09□□□□□ -1.43
USP48-206ENST00000464577 SLC45A2Q9UMX9 530 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 ARL2-SNX15V9GYD0 113 aa6.09□□□□□ -1.43
USP48-206ENST00000464577 TRGV10A0A0A0MS01 117 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 ZNF891A8MT65 544 aaPredicted RBP6.08□□□□□ -1.44
USP48-206ENST00000464577 C3orf80F5H4A9 247 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 GDF9O60383 454 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 NXPH2O95156 264 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 HAND1O96004 215 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 REG1AP05451 166 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 OR10J4P0C629 311 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 AREGP15514 252 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 EDDM3BP56851 147 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 CLDN18P56856 261 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 RPS16P62249 146 aaKnown RBP6.08□□□□□ -1.44
USP48-206ENST00000464577 GABRA6Q16445 453 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 RPEL1Q2QD12 228 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms