RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 GINS4Q9BRT9 223 aa14.52□□□□□ -0.09
SF3A1-205ENST00000463818 ELF5Q9UKW6 265 aaPredicted RBP14.52□□□□□ -0.09
SF3A1-205ENST00000463818 STUB1Q9UNE7 303 aa14.52□□□□□ -0.09
SF3A1-205ENST00000463818 IGKV1D-8A0A087WSZ0 117 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 SMIM30A4D0T7 59 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 SHOXO15266 292 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 SPNP16150 400 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 CBX3Q13185 183 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 Q6ZS49 121 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 TSPAN14Q8NG11 270 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 HARBI1Q96MB7 349 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 CENPOQ9BU64 300 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 TXNL4BQ9NX01 149 aaKnown RBP14.51□□□□□ -0.09
SF3A1-205ENST00000463818 TENM3Q9P273 2699 aa14.51□□□□□ -0.09
SF3A1-205ENST00000463818 KMT2CQ8NEZ4 4911 aaKnown RBP14.51□□□□□ -0.09
SF3A1-205ENST00000463818 H3BUA1 57 aa14.5□□□□□ -0.09
SF3A1-205ENST00000463818 RRASP10301 218 aa14.5□□□□□ -0.09
SF3A1-205ENST00000463818 ARL6IP1Q15041 203 aa14.5□□□□□ -0.09
SF3A1-205ENST00000463818 RTL8BQ17RB0 113 aa14.5□□□□□ -0.09
SF3A1-205ENST00000463818 H1FOOQ8IZA3 346 aaPredicted RBP14.5□□□□□ -0.09
SF3A1-205ENST00000463818 TMEM68Q96MH6 324 aa14.5□□□□□ -0.09
SF3A1-205ENST00000463818 OR4C12Q96R67 309 aa14.5□□□□□ -0.09
SF3A1-205ENST00000463818 ST6GALNAC5Q9BVH7 336 aa14.5□□□□□ -0.09
SF3A1-205ENST00000463818 SORL1Q92673 2214 aa14.5□□□□□ -0.09
SF3A1-205ENST00000463818 NBEAL2Q6ZNJ1 2754 aa14.49□□□□□ -0.09
SF3A1-205ENST00000463818 C13orf42A0A1B0GVH6 325 aa14.49□□□□□ -0.09
SF3A1-205ENST00000463818 NOTOA8MTQ0 251 aa14.49□□□□□ -0.09
SF3A1-205ENST00000463818 J3QRK9 145 aa14.49□□□□□ -0.09
SF3A1-205ENST00000463818 DTYMKP23919 212 aa14.49□□□□□ -0.09
SF3A1-205ENST00000463818 DUTP33316 252 aaKnown RBP14.49□□□□□ -0.09
SF3A1-205ENST00000463818 PITPNAQ00169 270 aa14.49□□□□□ -0.09
SF3A1-205ENST00000463818 NEDD8Q15843 81 aa14.49□□□□□ -0.09
SF3A1-205ENST00000463818 OR6Q1Q8NGQ2 317 aa14.49□□□□□ -0.09
SF3A1-205ENST00000463818 RANGRFQ9HD47 186 aaPredicted RBP14.49□□□□□ -0.09
SF3A1-205ENST00000463818 A0A0G2JLM5 398 aa14.48□□□□□ -0.09
SF3A1-205ENST00000463818 GP9P14770 177 aa14.48□□□□□ -0.09
SF3A1-205ENST00000463818 MRGPRG-AS1Q2M3A8 158 aa14.48□□□□□ -0.09
SF3A1-205ENST00000463818 DDB2Q92466 427 aa14.48□□□□□ -0.09
SF3A1-205ENST00000463818 ADTRPQ96IZ2 230 aa14.48□□□□□ -0.09
SF3A1-205ENST00000463818 ELOVL1Q9BW60 279 aa14.48□□□□□ -0.09
SF3A1-205ENST00000463818 ANKRD34BA5PLL1 514 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 MSGN1A6NI15 193 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 LINC00473A8K010 186 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 VMA21Q3ZAQ7 101 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 HACD4Q5VWC8 232 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 TPRA1Q86W33 373 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 SBSPONQ8IVN8 264 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 TEX45Q8NA69 505 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 TINAGL1Q9GZM7 467 aaPredicted RBP14.47□□□□□ -0.09
SF3A1-205ENST00000463818 OR51E2Q9H255 320 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 VCX3AQ9NNX9 186 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 SSR3Q9UNL2 185 aa14.47□□□□□ -0.09
SF3A1-205ENST00000463818 BRI3O95415 125 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 CRYZL1O95825 349 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 CTXN2P0C2S0 81 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 CD36P16671 472 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 ZP3P21754 424 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 UBE2KP61086 200 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 PRSS8Q16651 343 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 OVCH2Q7RTZ1 564 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 PHB2Q99623 299 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 DCSTAMPQ9H295 470 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 COA4Q9NYJ1 87 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 DAPK2Q9UIK4 370 aa14.46□□□□□ -0.09
SF3A1-205ENST00000463818 HLA-DQB1P01920 261 aa14.45□□□□□ -0.1
SF3A1-205ENST00000463818 SMIM18P0DKX4 95 aa14.45□□□□□ -0.1
SF3A1-205ENST00000463818 APELAP0DMC3 54 aa14.45□□□□□ -0.1
SF3A1-205ENST00000463818 NFYAP23511 347 aaPredicted RBP14.45□□□□□ -0.1
SF3A1-205ENST00000463818 KLF5Q13887 457 aaPredicted RBP14.45□□□□□ -0.1
SF3A1-205ENST00000463818 TNXAQ16473 311 aa14.45□□□□□ -0.1
SF3A1-205ENST00000463818 TIMM50Q3ZCQ8 353 aa14.45□□□□□ -0.1
SF3A1-205ENST00000463818 IDO2Q6ZQW0 420 aa14.45□□□□□ -0.1
SF3A1-205ENST00000463818 HAPLN4Q86UW8 402 aa14.45□□□□□ -0.1
SF3A1-205ENST00000463818 YIPF6Q96EC8 236 aa14.45□□□□□ -0.1
SF3A1-205ENST00000463818 OR2W1Q9Y3N9 320 aa14.45□□□□□ -0.1
SF3A1-205ENST00000463818 TMEM235A6NFC5 223 aa14.44□□□□□ -0.1
SF3A1-205ENST00000463818 AADACP22760 399 aa14.44□□□□□ -0.1
SF3A1-205ENST00000463818 DEFA5Q01523 94 aa14.44□□□□□ -0.1
SF3A1-205ENST00000463818 CNIH2Q6PI25 160 aa14.44□□□□□ -0.1
SF3A1-205ENST00000463818 ANKRD13BQ86YJ7 626 aa14.44□□□□□ -0.1
SF3A1-205ENST00000463818 ZNF645Q8N7E2 425 aa14.44□□□□□ -0.1
SF3A1-205ENST00000463818 OSR1Q8TAX0 266 aaPredicted RBP14.44□□□□□ -0.1
SF3A1-205ENST00000463818 NUDCD2Q8WVJ2 157 aa14.44□□□□□ -0.1
SF3A1-205ENST00000463818 USMG5Q96IX5 58 aa14.44□□□□□ -0.1
SF3A1-205ENST00000463818 RSRP1Q9BUV0 290 aa14.44□□□□□ -0.1
SF3A1-205ENST00000463818 FCGR3BO75015 233 aa14.43□□□□□ -0.1
SF3A1-205ENST00000463818 FRMD6-AS1P0C7T7 363 aa14.43□□□□□ -0.1
SF3A1-205ENST00000463818 GNG2P59768 71 aa14.43□□□□□ -0.1
SF3A1-205ENST00000463818 DYRK1AQ13627 763 aa14.43□□□□□ -0.1
SF3A1-205ENST00000463818 ZNF343Q6P1L6 599 aa14.43□□□□□ -0.1
SF3A1-205ENST00000463818 SFXN4Q6P4A7 337 aa14.43□□□□□ -0.1
SF3A1-205ENST00000463818 ADAD2Q8NCV1 583 aaKnown RBP14.43□□□□□ -0.1
SF3A1-205ENST00000463818 SRSF12Q8WXF0 261 aaKnown RBP14.43□□□□□ -0.1
SF3A1-205ENST00000463818 DCUN1D5Q9BTE7 237 aa14.43□□□□□ -0.1
SF3A1-205ENST00000463818 PEF1Q9UBV8 284 aaKnown RBP14.43□□□□□ -0.1
SF3A1-205ENST00000463818 IGKV1D-13A0A0B4J2D9 117 aa14.42□□□□□ -0.1
SF3A1-205ENST00000463818 MPPED1O15442 326 aa14.42□□□□□ -0.1
SF3A1-205ENST00000463818 SSX5O60225 188 aa14.42□□□□□ -0.1
SF3A1-205ENST00000463818 TMEM127O75204 238 aa14.42□□□□□ -0.1
SF3A1-205ENST00000463818 RBMXL2O75526 392 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms