RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ATG5Q9H1Y0 275 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 DCSTAMPQ9H295 470 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 STUB1Q9UNE7 303 aa15.82■□□□□ 0.12
PDLIM4-205ENST00000463615 SRRM4A7MD48 611 aaKnown RBP15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 TRGV3P03979 118 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 PJVKQ0ZLH3 352 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 CDNFQ49AH0 187 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 HACD4Q5VWC8 232 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 TEX45Q8NA69 505 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 BVESQ8NE79 360 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 GRPEL2Q8TAA5 225 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 STAB2Q8WWQ8 2551 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 Q9H521 79 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 SMAD5-AS1Q9Y6J3 95 aa15.81■□□□□ 0.12
PDLIM4-205ENST00000463615 A0A0G2JLM5 398 aa15.8■□□□□ 0.12
PDLIM4-205ENST00000463615 SAP30O75446 220 aa15.8■□□□□ 0.12
PDLIM4-205ENST00000463615 CNIH1O95406 144 aa15.8■□□□□ 0.12
PDLIM4-205ENST00000463615 IGHV3-11P01762 117 aa15.8■□□□□ 0.12
PDLIM4-205ENST00000463615 CTXN2P0C2S0 81 aa15.8■□□□□ 0.12
PDLIM4-205ENST00000463615 UBE2KP61086 200 aa15.8■□□□□ 0.12
PDLIM4-205ENST00000463615 PITPNAQ00169 270 aa15.8■□□□□ 0.12
PDLIM4-205ENST00000463615 ELF5Q9UKW6 265 aaPredicted RBP15.8■□□□□ 0.12
PDLIM4-205ENST00000463615 U3KQK5 164 aa15.8■□□□□ 0.12
PDLIM4-205ENST00000463615 SHOXO15266 292 aa15.79■□□□□ 0.12
PDLIM4-205ENST00000463615 PSMB9P28065 219 aa15.79■□□□□ 0.12
PDLIM4-205ENST00000463615 SCAND1P57086 179 aa15.79■□□□□ 0.12
PDLIM4-205ENST00000463615 OR6Q1Q8NGQ2 317 aa15.79■□□□□ 0.12
PDLIM4-205ENST00000463615 OSR1Q8TAX0 266 aaPredicted RBP15.79■□□□□ 0.12
PDLIM4-205ENST00000463615 RANGRFQ9HD47 186 aaPredicted RBP15.79■□□□□ 0.12
PDLIM4-205ENST00000463615 RBM7Q9Y580 266 aaKnown RBP15.79■□□□□ 0.12
PDLIM4-205ENST00000463615 LINC00473A8K010 186 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 SLC22A5O76082 557 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 HLA-DQB1P01920 261 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 SPNP16150 400 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 ZP3P21754 424 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 VMA21Q3ZAQ7 101 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 ZNF645Q8N7E2 425 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 OR5T1Q8NG75 326 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 TINAGL1Q9GZM7 467 aaPredicted RBP15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 SSR3Q9UNL2 185 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 OR2W1Q9Y3N9 320 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 TNCP24821 2201 aa15.78■□□□□ 0.12
PDLIM4-205ENST00000463615 C13orf42A0A1B0GVH6 325 aa15.77■□□□□ 0.12
PDLIM4-205ENST00000463615 AADACP22760 399 aa15.77■□□□□ 0.12
PDLIM4-205ENST00000463615 PRSS8Q16651 343 aa15.77■□□□□ 0.12
PDLIM4-205ENST00000463615 SFXN4Q6P4A7 337 aa15.77■□□□□ 0.12
PDLIM4-205ENST00000463615 CNIH2Q6PI25 160 aa15.77■□□□□ 0.12
PDLIM4-205ENST00000463615 ZNF773Q6PK81 442 aa15.77■□□□□ 0.12
PDLIM4-205ENST00000463615 NBEAL2Q6ZNJ1 2754 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 SMIM30A4D0T7 59 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 LY86O95711 162 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 GP9P14770 177 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 OVCH2Q7RTZ1 564 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 USMG5Q96IX5 58 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 OR4C12Q96R67 309 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 ST6GALNAC5Q9BVH7 336 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 ELOVL1Q9BW60 279 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 ZNF355PQ9NSJ1 428 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 DAPK2Q9UIK4 370 aa15.76■□□□□ 0.11
PDLIM4-205ENST00000463615 TMEM235A6NFC5 223 aa15.75■□□□□ 0.11
PDLIM4-205ENST00000463615 CRYZL1O95825 349 aa15.75■□□□□ 0.11
PDLIM4-205ENST00000463615 IGLV1-51P01701 117 aa15.75■□□□□ 0.11
PDLIM4-205ENST00000463615 IGLV2-14P01704 120 aa15.75■□□□□ 0.11
PDLIM4-205ENST00000463615 KLF5Q13887 457 aaPredicted RBP15.75■□□□□ 0.11
PDLIM4-205ENST00000463615 ZNF343Q6P1L6 599 aa15.75■□□□□ 0.11
PDLIM4-205ENST00000463615 ADAD2Q8NCV1 583 aaKnown RBP15.75■□□□□ 0.11
PDLIM4-205ENST00000463615 RBMX2Q9Y388 322 aaKnown RBP15.75■□□□□ 0.11
PDLIM4-205ENST00000463615 RRP15Q9Y3B9 282 aaKnown RBP15.75■□□□□ 0.11
PDLIM4-205ENST00000463615 HUWE1Q7Z6Z7 4374 aaKnown RBP15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 MSGN1A6NI15 193 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 SSX5O60225 188 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 CREBL2O60519 120 aaPredicted RBP15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 TMEM127O75204 238 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 TUSC2O75896 110 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 SDC2P34741 201 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 LGALS14Q8TCE9 139 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 NUDCD2Q8WVJ2 157 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 OR51E2Q9H255 320 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 RHBDL2Q9NX52 303 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 ANXA10Q9UJ72 324 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 ETV7Q9Y603 341 aa15.74■□□□□ 0.11
PDLIM4-205ENST00000463615 A0A0A6YYH2 397 aa15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 A6NJ64 397 aa15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 OR9G9P0C7N8 305 aa15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 CD36P16671 472 aa15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 GNG2P59768 71 aa15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 EIF4EBP1Q13541 118 aaPredicted RBP15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 DYRK1AQ13627 763 aa15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 CDK10Q15131 360 aa15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 SRSF12Q8WXF0 261 aaKnown RBP15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 PRELID3BQ9Y3B1 194 aa15.73■□□□□ 0.11
PDLIM4-205ENST00000463615 IGKV1D-13A0A0B4J2D9 117 aa15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 SAA1P0DJI8 122 aaPredicted RBP15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 IGKV1-13P0DP09 117 aa15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 NFYAP23511 347 aaPredicted RBP15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 MSMO1Q15800 293 aa15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 KCTD9Q7L273 389 aa15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 MMD2Q8IY49 270 aa15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 HSD17B10Q99714 261 aaKnown RBP15.72■□□□□ 0.11
PDLIM4-205ENST00000463615 ASCL2Q99929 193 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms