RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PYHIN1Q6K0P9 492 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 GVQW1Q8N7I0 195 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 OR5M8Q8NGP6 311 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 OR13F1Q8NGS4 319 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 DDB2Q92466 427 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 KCTD12Q96CX2 325 aaKnown RBP12.65□□□□□ -0.38
COL1A1-202ENST00000463440 FAM103A1Q9BTL3 118 aaKnown RBP12.65□□□□□ -0.38
COL1A1-202ENST00000463440 TPSG1Q9NRR2 321 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 AURKAIP1Q9NWT8 199 aaPredicted RBP12.65□□□□□ -0.38
COL1A1-202ENST00000463440 RBMX2Q9Y388 322 aaKnown RBP12.65□□□□□ -0.38
COL1A1-202ENST00000463440 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.38
COL1A1-202ENST00000463440 IGKV1D-13A0A0B4J2D9 117 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 LINC00473A8K010 186 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 TUSC2O75896 110 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 CRYZL1O95825 349 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 CRYGBP07316 175 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 IGKV1-13P0DP09 117 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 VBP1P61758 197 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 NCS1P62166 190 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 GNB1P62873 340 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 RUNX1Q01196 453 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 KIAA0141Q14154 515 aaPredicted RBP12.64□□□□□ -0.39
COL1A1-202ENST00000463440 VMA21Q3ZAQ7 101 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 TMEM69Q5SWH9 247 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 KCTD9Q7L273 389 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 LFNGQ8NES3 379 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 GRPEL2Q8TAA5 225 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 OSR1Q8TAX0 266 aaPredicted RBP12.64□□□□□ -0.39
COL1A1-202ENST00000463440 GNB4Q9HAV0 340 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 IFT46Q9NQC8 304 aa12.64□□□□□ -0.39
COL1A1-202ENST00000463440 MRPS7Q9Y2R9 242 aaKnown RBP12.64□□□□□ -0.39
COL1A1-202ENST00000463440 SRRM4A7MD48 611 aaKnown RBP12.63□□□□□ -0.39
COL1A1-202ENST00000463440 I3L521 148 aa12.63□□□□□ -0.39
COL1A1-202ENST00000463440 SOX15O60248 233 aa12.63□□□□□ -0.39
COL1A1-202ENST00000463440 PTHLHP12272 177 aa12.63□□□□□ -0.39
COL1A1-202ENST00000463440 FCGR2CP31995 323 aa12.63□□□□□ -0.39
COL1A1-202ENST00000463440 UBE2KP61086 200 aa12.63□□□□□ -0.39
COL1A1-202ENST00000463440 TEX45Q8NA69 505 aa12.63□□□□□ -0.39
COL1A1-202ENST00000463440 OR11H1Q8NG94 326 aa12.63□□□□□ -0.39
COL1A1-202ENST00000463440 MRAPQ8TCY5 172 aa12.63□□□□□ -0.39
COL1A1-202ENST00000463440 HSD17B10Q99714 261 aaKnown RBP12.63□□□□□ -0.39
COL1A1-202ENST00000463440 ARPC1BO15143 372 aaKnown RBP12.62□□□□□ -0.39
COL1A1-202ENST00000463440 FCGR3BO75015 233 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 SMIM18P0DKX4 95 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 TAS2R20P59543 309 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 PJVKQ0ZLH3 352 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 FHL3Q13643 280 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 OR5AP2Q8NGF4 316 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 TMEM68Q96MH6 324 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 DCUN1D5Q9BTE7 237 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 SLA2Q9H6Q3 261 aa12.62□□□□□ -0.39
COL1A1-202ENST00000463440 ZMAT5Q9UDW3 170 aaKnown RBP12.62□□□□□ -0.39
COL1A1-202ENST00000463440 MEIS3P1A6NDR6 274 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 IGLV2-14P01704 120 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 FCER2P06734 321 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 OR8U8P0C7N1 319 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 AADACP22760 399 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 HOXD3P31249 432 aaPredicted RBP12.61□□□□□ -0.39
COL1A1-202ENST00000463440 ZNF616Q08AN1 781 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 EGFEM1PQ0D2K5 195 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 CDK10Q15131 360 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 MSMO1Q15800 293 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 ZNF66Q6ZN08 573 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 OVCH2Q7RTZ1 564 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 ANKRD13BQ86YJ7 626 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 CASTOR1Q8WTX7 329 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 SECTM1Q8WVN6 248 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 TCTEX1D2Q8WW35 142 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 ACOT12Q8WYK0 555 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 SNAPC3Q92966 411 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 CMTM3Q96MX0 182 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 COMMD3Q9UBI1 195 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 TGP01266 2768 aa12.61□□□□□ -0.39
COL1A1-202ENST00000463440 SMIM31A0A1B0GVY4 71 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 H3BUA1 57 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 CREBL2O60519 120 aaPredicted RBP12.6□□□□□ -0.39
COL1A1-202ENST00000463440 PPYP01298 95 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 PRSS3P35030 304 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 RORCP51449 518 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 TPPP2P59282 170 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 KRTAP10-11P60412 298 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 RPL30P62888 115 aaKnown RBP12.6□□□□□ -0.39
COL1A1-202ENST00000463440 SSBP2P81877 361 aaPredicted RBP12.6□□□□□ -0.39
COL1A1-202ENST00000463440 PRSS8Q16651 343 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 OR2B11Q5JQS5 317 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 MFSD4AQ8N468 514 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 ZBTB34Q8NCN2 500 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 OR4S2Q8NH73 311 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 MS4A10Q96PG2 267 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 MRPS26Q9BYN8 205 aaKnown RBP12.6□□□□□ -0.39
COL1A1-202ENST00000463440 ZNF355PQ9NSJ1 428 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 TAS2R8Q9NYW2 309 aa12.6□□□□□ -0.39
COL1A1-202ENST00000463440 GABARAPO95166 117 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 APOA1P02647 267 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 TRGV3P03979 118 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 EIF4EP06730 217 aaKnown RBP12.59□□□□□ -0.39
COL1A1-202ENST00000463440 LGALS1P09382 135 aaKnown RBP12.59□□□□□ -0.39
COL1A1-202ENST00000463440 EIF4EBP1Q13541 118 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms