RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ID3Q02535 119 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 HABP2Q14520 560 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-213ENST00000462730 ETV3LQ6ZN32 361 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 AGMATQ9BSE5 352 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 CLN8Q9UBY8 286 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 CACNG5Q9UF02 275 aa11.97□□□□□ -0.49
HDAC6-213ENST00000462730 ZFYVE26Q68DK2 2539 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 TRAV20A0A0B4J274 112 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 C17orf98A8MV24 154 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 RAMP3O60896 148 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 PITX3O75364 302 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 ZNF816Q0VGE8 651 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-213ENST00000462730 ZNF124Q15973 351 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 ZNF66Q6ZN08 573 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 Q6ZRM9 215 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 MALSU1Q96EH3 234 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 CLCC1Q96S66 551 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 FAM212BQ9NTI7 297 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-213ENST00000462730 GFOD1Q9NXC2 390 aa11.96□□□□□ -0.49
HDAC6-213ENST00000462730 FAM24AA6NFZ4 105 aa11.96□□□□□ -0.5
HDAC6-213ENST00000462730 TSPAN15O95858 294 aa11.96□□□□□ -0.5
HDAC6-213ENST00000462730 PPT1P50897 306 aa11.96□□□□□ -0.5
HDAC6-213ENST00000462730 AKIRIN2Q53H80 203 aa11.96□□□□□ -0.5
HDAC6-213ENST00000462730 OR2C3Q8N628 320 aa11.96□□□□□ -0.5
HDAC6-213ENST00000462730 FAM216AQ8WUB2 273 aa11.96□□□□□ -0.5
HDAC6-213ENST00000462730 LEAP2Q969E1 77 aa11.96□□□□□ -0.5
HDAC6-213ENST00000462730 HSD17B10Q99714 261 aaKnown RBP11.96□□□□□ -0.5
HDAC6-213ENST00000462730 ARV1Q9H2C2 271 aa11.96□□□□□ -0.5
HDAC6-213ENST00000462730 SLC25A10Q9UBX3 287 aaPredicted RBP11.96□□□□□ -0.5
HDAC6-213ENST00000462730 HRNRQ86YZ3 2850 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-213ENST00000462730 IGHV1-69-2A0A0G2JMI3 117 aa11.95□□□□□ -0.5
HDAC6-213ENST00000462730 IGSF23A1L1A6 192 aa11.95□□□□□ -0.5
HDAC6-213ENST00000462730 ZNF729A6NN14 1252 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-213ENST00000462730 LINC00473A8K010 186 aa11.95□□□□□ -0.5
HDAC6-213ENST00000462730 SLC31A2O15432 143 aa11.95□□□□□ -0.5
HDAC6-213ENST00000462730 S1PR2O95136 353 aa11.95□□□□□ -0.5
HDAC6-213ENST00000462730 EWSR1Q01844 656 aaKnown RBP eCLIP11.95□□□□□ -0.5
HDAC6-213ENST00000462730 UTF1Q5T230 341 aa11.95□□□□□ -0.5
HDAC6-213ENST00000462730 WFDC1Q9HC57 220 aa11.95□□□□□ -0.5
HDAC6-213ENST00000462730 IDI2-AS1Q9NZ38 188 aa11.95□□□□□ -0.5
HDAC6-213ENST00000462730 ABCA4P78363 2273 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 hADV38S2A0JD32 116 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 CHST1O43916 411 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 MMP9P14780 707 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 SNCAP37840 140 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 AKR1C3P42330 323 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 ZNF134P52741 427 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 BRWD1-AS2P59051 145 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 LINC00205P59089 165 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 SNRPEP62304 92 aaKnown RBP11.94□□□□□ -0.5
HDAC6-213ENST00000462730 NHLH2Q02577 135 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 MIDNQ504T8 468 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 TCTEX1D1Q8N7M0 179 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 CORO2AQ92828 525 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 HIST1H2BAQ96A08 127 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 ABHD14AQ9BUJ0 271 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 IFI27L2Q9H2X8 130 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 RPS10P5Q9NQ39 176 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 LYRM2Q9NU23 88 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-213ENST00000462730 MMP24Q9Y5R2 645 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 DSCAML1Q8TD84 2053 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 EPG5Q9HCE0 2579 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 M0R1X1 148 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 TMEM50AO95807 157 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 SEC11BP0C7V7 166 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 DANCRP0C864 163 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 IGFBP2P18065 325 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 G6PCP35575 357 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 PPOXP50336 477 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 RPL39P5Q59GN2 51 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 PRAMEF5Q5TYX0 476 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 LYPD2Q6UXB3 125 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 ZNF843Q8N446 348 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 SLC25A31Q9H0C2 315 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 C19orf12Q9NSK7 152 aa11.94□□□□□ -0.5
HDAC6-213ENST00000462730 BORCS7-ASMTA0A0B4J1R7 106 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 A0A1W2PPE3 182 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 A0A1W2PPR1 153 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 KIAA1324LA8MWY0 1029 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-213ENST00000462730 DUTP33316 252 aaKnown RBP11.93□□□□□ -0.5
HDAC6-213ENST00000462730 RAB7AP51149 207 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 ZNF616Q08AN1 781 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 AWAT1Q58HT5 328 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 NCR3LG1Q68D85 454 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 STX12Q86Y82 276 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 SCRT1Q9BWW7 348 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 SMDT1Q9H4I9 107 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 GSN-AS1Q9NRJ2 163 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 CBLN4Q9NTU7 201 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 LINC00312Q9Y6C7 94 aa11.93□□□□□ -0.5
HDAC6-213ENST00000462730 ITGB1BP1O14713 200 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 TNFRSF13BO14836 293 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-213ENST00000462730 NDUFB3O43676 98 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 PROP1O75360 226 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 FCN3O75636 299 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 C1QL1O75973 258 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 KRASP01116 189 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 SOD3P08294 240 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 RPL31P62899 125 aaKnown RBP11.92□□□□□ -0.5
HDAC6-213ENST00000462730 GUK1Q16774 197 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms