RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 POMPQ9Y244 141 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 CACNG2Q9Y698 323 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 PTPRFP10586 1907 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 TMEM223A0PJW6 202 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 IZUMO1RA6ND01 250 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 C9JQL5 133 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 BHLHE40O14503 412 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 EIF1BO60739 113 aaKnown RBP1.88□□□□□ -2.11
SMC4-203ENST00000462668 C1QBP02746 253 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 MAS1P04201 325 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 NTF3P20783 257 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 HIST1H1TP22492 207 aaPredicted RBP1.88□□□□□ -2.11
SMC4-203ENST00000462668 EIF1P41567 113 aaKnown RBP1.88□□□□□ -2.11
SMC4-203ENST00000462668 FAM131AQ6UXB0 335 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 UBALD2Q8IYN6 164 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 OR6V1Q8N148 313 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 OR2D3Q8NGH3 330 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 C1QTNF6Q9BXI9 259 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 ARMC1Q9NVT9 282 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 LOC400499M0QZD8 3231 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 IGSF9BQ9UPX0 1349 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 TGIF2-C20orf24A0A0A6YYL0 155 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 GIPP09681 153 aaPredicted RBP1.88□□□□□ -2.11
SMC4-203ENST00000462668 ADORA1P30542 326 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 REG1BP48304 166 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 RUNX1Q01196 453 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 SNCBQ16143 134 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 ACSBG2Q5FVE4 666 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 ZNF645Q8N7E2 425 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 TMEM75Q8N9X5 138 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 MAL2Q969L2 176 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 OR51I2Q9H344 312 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 OR12D3Q9UGF7 316 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 DKKL1Q9UK85 242 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 RFNGQ9Y644 331 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 CUBNO60494 3623 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 DAPK1P53355 1430 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 MYO16Q9Y6X6 1858 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 TRAV19A0A0A6YYK7 116 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 CIB4A0PJX0 185 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 APOMO95445 188 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 CD5P06127 495 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 OPRK1P41145 380 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 BTN3A2P78410 334 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 KIF26BQ2KJY2 2108 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 PLPPR5Q32ZL2 321 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 GFI1BQ5VTD9 330 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 LPCAT3Q6P1A2 487 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 STX12Q86Y82 276 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 ZNF433Q8N7K0 673 aaPredicted RBP1.87□□□□□ -2.11
SMC4-203ENST00000462668 OR5P3Q8WZ94 311 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 PYURFQ96I23 114 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 ALX4Q9H161 411 aaPredicted RBP1.87□□□□□ -2.11
SMC4-203ENST00000462668 TAAR3PQ9P1P4 343 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 FARSAQ9Y285 508 aaKnown RBP1.87□□□□□ -2.11
SMC4-203ENST00000462668 ZZEF1O43149 2961 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 FAM159BA6NKW6 160 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 CRYBA1P05813 215 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 SOD3P08294 240 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 RCVRNP35243 200 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 HSPA9P38646 679 aaKnown RBP1.87□□□□□ -2.11
SMC4-203ENST00000462668 RPS10P46783 165 aaKnown RBP1.87□□□□□ -2.11
SMC4-203ENST00000462668 HLA-DRB3P79483 266 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 TEX36Q5VZQ5 186 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 ZNRF2Q8NHG8 242 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 Q8WTZ3 238 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 ZNF355PQ9NSJ1 428 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 LYSTQ99698 3801 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 FRYLO94915 3013 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 NDUFC2-KCTD14E9PQ53 114 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 CHST10O43529 356 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 CYB5R3P00387 301 aaPredicted RBP1.87□□□□□ -2.11
SMC4-203ENST00000462668 IGHV1-46P01743 117 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 PFN1P07737 140 aaKnown RBP1.87□□□□□ -2.11
SMC4-203ENST00000462668 UCHL3P15374 230 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 ADIGQ0VDE8 80 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 KRR1Q13601 381 aaKnown RBP1.87□□□□□ -2.11
SMC4-203ENST00000462668 POU6F1Q14863 301 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 YIF1BQ5BJH7 314 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 OLIG3Q7RTU3 272 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 C3orf22Q8N5N4 141 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 ZDHHC22Q8N966 263 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 SLC25A46Q96AG3 418 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 LINC01587Q99440 93 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 TXNIPQ9H3M7 391 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 STOML2Q9UJZ1 356 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 VPS13AQ96RL7 3174 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 BPTFQ12830 3046 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 NUP155O75694 1391 aa1.87□□□□□ -2.11
SMC4-203ENST00000462668 DISC1C4P0D8 188 aa1.86□□□□□ -2.11
SMC4-203ENST00000462668 H3BP45 60 aa1.86□□□□□ -2.11
SMC4-203ENST00000462668 RBMXP38159 391 aaKnown RBP1.86□□□□□ -2.11
SMC4-203ENST00000462668 RAB25P57735 213 aa1.86□□□□□ -2.11
SMC4-203ENST00000462668 C1DQ13901 141 aaKnown RBP1.86□□□□□ -2.11
SMC4-203ENST00000462668 TMEM105Q8N8V8 129 aa1.86□□□□□ -2.11
SMC4-203ENST00000462668 STARD4Q96DR4 205 aa1.86□□□□□ -2.11
SMC4-203ENST00000462668 SLC35G5Q96KT7 338 aa1.86□□□□□ -2.11
SMC4-203ENST00000462668 PEBP4Q96S96 227 aa1.86□□□□□ -2.11
SMC4-203ENST00000462668 UPK3BQ9BT76 320 aa1.86□□□□□ -2.11
SMC4-203ENST00000462668 TBL1XR1Q9BZK7 514 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms