RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 TBPP20226 339 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 GCSHP23434 173 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 PTBP1P26599 531 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS36-202ENST00000462289 BRS3P32247 399 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 PRSS3P35030 304 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 SOX6P35712 828 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 CEACAM6P40199 344 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 OR3A3P47888 321 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 RAB13P51153 203 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 GNG2P59768 71 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 DYRK1AQ13627 763 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 ARFRP1Q13795 201 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 ZNF79Q15937 498 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 MRGPRG-AS1Q2M3A8 158 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 AWAT1Q58HT5 328 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 TMEM69Q5SWH9 247 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 Q6ZNX1 250 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 TGIF2LXQ8IUE1 241 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 DRAM1Q8N682 238 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 C5orf56Q8N8D9 126 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 NPBQ8NG41 125 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 OR10V1Q8NGI7 309 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 OR10X1Q8NGY0 326 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 C15orf40Q8WUR7 153 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 TOMM40LQ969M1 308 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 TRIM63Q969Q1 353 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 RPEQ96AT9 228 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 RNF5Q99942 180 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 CITED1Q99966 193 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 COMMD3Q9UBI1 195 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 HILPDAQ9Y5L2 63 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 CLPSL1A2RUU4 121 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 ZNF736B4DX44 427 aaPredicted RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 RBFOX2O43251 390 aaKnown RBP eCLIP4.53□□□□□ -1.68
VPS36-202ENST00000462289 RBBP9O75884 186 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 SLC22A5O76082 557 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 IGLV2-23P01705 113 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 IGHV3-7P01780 117 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 IGHG2P01859 326 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 CRYGBP07316 175 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 SNRNP70P08621 437 aaKnown RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 IL6RP08887 468 aaPredicted RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 ZNF735P0CB33 412 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 OR5H8P0DN80 308 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 IL3RAP26951 378 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 TNFSF8P32971 234 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 DUTP33316 252 aaKnown RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 RCVRNP35243 200 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 GNG10P50151 68 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 ARHGDIBP52566 201 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 RAG2P55895 527 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 UCP3P55916 312 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 ACTBP60709 375 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 ACTG1P63261 375 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 SSBP2P81877 361 aaPredicted RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 CFHR3Q02985 330 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 CDK10Q15131 360 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 POU2AF1Q16633 256 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 RPL39P5Q59GN2 51 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 AADACL3Q5VUY0 350 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 PYHIN1Q6K0P9 492 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 PRR18Q8N4B5 295 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 ZNF645Q8N7E2 425 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 RNF152Q8N8N0 203 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 Q8N9W7 124 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 ZNF383Q8NA42 475 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 ZBTB34Q8NCN2 500 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 OR6Q1Q8NGQ2 317 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 OR4F5Q8NH21 305 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 OR52I2Q8NH67 350 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 OR56B4Q8NH76 319 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 OR10J5Q8NHC4 309 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 IL1F10Q8WWZ1 152 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 DEDD2Q8WXF8 326 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 MAFIPQ8WZ33 124 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 MRGPRFQ96AM1 343 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 MOB3AQ96BX8 217 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 ABHD14BQ96IU4 210 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 DUX5Q96PT3 197 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 SDHCQ99643 169 aaPredicted RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 MRPL20Q9BYC9 149 aaKnown RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 CHMP1AQ9HD42 196 aaPredicted RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 FAM212BQ9NTI7 297 aaPredicted RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 LIN7CQ9NUP9 197 aaKnown RBP4.53□□□□□ -1.68
VPS36-202ENST00000462289 SDHAF2Q9NX18 166 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 SLC2A8Q9NY64 477 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 EXTL2Q9UBQ6 330 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 KLK11Q9UBX7 282 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
VPS36-202ENST00000462289 BTBD17A6NE02 478 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 LINC00473A8K010 186 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 RNF212BA8MTL3 300 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 BRI3O95415 125 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 MOSP00540 346 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 PPYP01298 95 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 IGKV1D-33P01593 117 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 IGKV1-33P01594 117 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 HLA-DRB1P01911 266 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 IGKV1-16P04430 117 aa4.52□□□□□ -1.69
VPS36-202ENST00000462289 IGF1P05019 195 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms