RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 RPL22L1Q6P5R6 122 aaKnown RBP11.21□□□□□ -0.61
APP-211ENST00000462267 MOB1BQ7L9L4 216 aa11.21□□□□□ -0.61
APP-211ENST00000462267 ZNF575Q86XF7 245 aa11.21□□□□□ -0.61
APP-211ENST00000462267 CDH26Q8IXH8 852 aa11.21□□□□□ -0.61
APP-211ENST00000462267 TTC9CQ8N5M4 171 aa11.21□□□□□ -0.61
APP-211ENST00000462267 TEX45Q8NA69 505 aa11.21□□□□□ -0.61
APP-211ENST00000462267 NEDD4LQ96PU5 975 aa11.21□□□□□ -0.61
APP-211ENST00000462267 SPIN2AQ99865 258 aa11.21□□□□□ -0.61
APP-211ENST00000462267 SPIN2BQ9BPZ2 258 aa11.21□□□□□ -0.61
APP-211ENST00000462267 SRRM4A7MD48 611 aaKnown RBP11.2□□□□□ -0.62
APP-211ENST00000462267 SHOXO15266 292 aa11.2□□□□□ -0.62
APP-211ENST00000462267 ATP8B1O43520 1251 aa11.2□□□□□ -0.62
APP-211ENST00000462267 NAPSAO96009 420 aa11.2□□□□□ -0.62
APP-211ENST00000462267 TAGLNQ01995 201 aaKnown RBP11.2□□□□□ -0.62
APP-211ENST00000462267 CBX3Q13185 183 aa11.2□□□□□ -0.62
APP-211ENST00000462267 SLC25A42Q86VD7 318 aa11.2□□□□□ -0.62
APP-211ENST00000462267 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.2□□□□□ -0.62
APP-211ENST00000462267 FAAP24Q9BTP7 215 aa11.2□□□□□ -0.62
APP-211ENST00000462267 C5orf66Q9H5L9 145 aa11.2□□□□□ -0.62
APP-211ENST00000462267 MRPL27Q9P0M9 148 aaKnown RBP11.2□□□□□ -0.62
APP-211ENST00000462267 OR1A1Q9P1Q5 309 aa11.2□□□□□ -0.62
APP-211ENST00000462267 ODF3L2Q3SX64 289 aa11.19□□□□□ -0.62
APP-211ENST00000462267 VMA21Q3ZAQ7 101 aa11.19□□□□□ -0.62
APP-211ENST00000462267 CLEC19AQ6UXS0 136 aa11.19□□□□□ -0.62
APP-211ENST00000462267 OR11H2Q8NH07 326 aa11.19□□□□□ -0.62
APP-211ENST00000462267 SETD6Q8TBK2 473 aa11.19□□□□□ -0.62
APP-211ENST00000462267 C6orf62Q9GZU0 229 aaPredicted RBP11.19□□□□□ -0.62
APP-211ENST00000462267 CSTL1Q9H114 145 aa11.19□□□□□ -0.62
APP-211ENST00000462267 CHMP1AQ9HD42 196 aaPredicted RBP11.19□□□□□ -0.62
APP-211ENST00000462267 MED4Q9NPJ6 270 aa11.19□□□□□ -0.62
APP-211ENST00000462267 TRAV8-7A0A075B6U6 113 aa11.18□□□□□ -0.62
APP-211ENST00000462267 MPTX1A8MV57 137 aa11.18□□□□□ -0.62
APP-211ENST00000462267 TSPAN4O14817 238 aa11.18□□□□□ -0.62
APP-211ENST00000462267 CDK2AP2O75956 126 aa11.18□□□□□ -0.62
APP-211ENST00000462267 GALP22466 123 aa11.18□□□□□ -0.62
APP-211ENST00000462267 UBE2KP61086 200 aa11.18□□□□□ -0.62
APP-211ENST00000462267 ZNF585BQ52M93 769 aa11.18□□□□□ -0.62
APP-211ENST00000462267 XAF1Q6GPH4 301 aa11.18□□□□□ -0.62
APP-211ENST00000462267 NR2C2APQ86WQ0 139 aa11.18□□□□□ -0.62
APP-211ENST00000462267 MAPKAPK5-AS1Q8N8E1 139 aa11.18□□□□□ -0.62
APP-211ENST00000462267 ACOT12Q8WYK0 555 aa11.18□□□□□ -0.62
APP-211ENST00000462267 CCDC140Q96MF4 163 aa11.18□□□□□ -0.62
APP-211ENST00000462267 HRH4Q9H3N8 390 aa11.18□□□□□ -0.62
APP-211ENST00000462267 RIMS4Q9H426 269 aaPredicted RBP11.18□□□□□ -0.62
APP-211ENST00000462267 POMPQ9Y244 141 aa11.18□□□□□ -0.62
APP-211ENST00000462267 ZNF257Q9Y2Q1 563 aa11.18□□□□□ -0.62
APP-211ENST00000462267 TRBV5-5A0A0J9YX44 114 aa11.17□□□□□ -0.62
APP-211ENST00000462267 DYNC1I1O14576 645 aa11.17□□□□□ -0.62
APP-211ENST00000462267 ACTL6BO94805 426 aa11.17□□□□□ -0.62
APP-211ENST00000462267 RRASP10301 218 aa11.17□□□□□ -0.62
APP-211ENST00000462267 ADMP35318 185 aa11.17□□□□□ -0.62
APP-211ENST00000462267 ELLP55199 621 aaPredicted RBP11.17□□□□□ -0.62
APP-211ENST00000462267 RTL8BQ17RB0 113 aa11.17□□□□□ -0.62
APP-211ENST00000462267 C6orf201Q7Z4U5 140 aa11.17□□□□□ -0.62
APP-211ENST00000462267 POM121L12Q8N7R1 296 aa11.17□□□□□ -0.62
APP-211ENST00000462267 SETD9Q8NE22 299 aa11.17□□□□□ -0.62
APP-211ENST00000462267 GHRLQ9UBU3 117 aa11.17□□□□□ -0.62
APP-211ENST00000462267 MGAT4AQ9UM21 535 aa11.17□□□□□ -0.62
APP-211ENST00000462267 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
APP-211ENST00000462267 TRBV6-6A0A0A6YYG2 114 aa11.16□□□□□ -0.62
APP-211ENST00000462267 CREBL2O60519 120 aaPredicted RBP11.16□□□□□ -0.62
APP-211ENST00000462267 IGHV3-23P01764 117 aa11.16□□□□□ -0.62
APP-211ENST00000462267 MYOD1P15172 320 aa11.16□□□□□ -0.62
APP-211ENST00000462267 HLA-DRB3P79483 266 aa11.16□□□□□ -0.62
APP-211ENST00000462267 LGALS9BQ3B8N2 356 aa11.16□□□□□ -0.62
APP-211ENST00000462267 Q499Y3 187 aa11.16□□□□□ -0.62
APP-211ENST00000462267 LAMTOR1Q6IAA8 161 aa11.16□□□□□ -0.62
APP-211ENST00000462267 UNQ9165/PRO28630Q6UXU0 137 aa11.16□□□□□ -0.62
APP-211ENST00000462267 IDO2Q6ZQW0 420 aa11.16□□□□□ -0.62
APP-211ENST00000462267 OR13C5Q8NGS8 318 aa11.16□□□□□ -0.62
APP-211ENST00000462267 OR5B3Q8NH48 314 aa11.16□□□□□ -0.62
APP-211ENST00000462267 OR4A5Q8NH83 315 aa11.16□□□□□ -0.62
APP-211ENST00000462267 SMIM19Q96E16 107 aa11.16□□□□□ -0.62
APP-211ENST00000462267 UFC1Q9Y3C8 167 aa11.16□□□□□ -0.62
APP-211ENST00000462267 RPL36Q9Y3U8 105 aaKnown RBP11.16□□□□□ -0.62
APP-211ENST00000462267 OR4C46A6NHA9 309 aa11.15□□□□□ -0.62
APP-211ENST00000462267 M0R2N4 97 aa11.15□□□□□ -0.62
APP-211ENST00000462267 DEFB4AO15263 64 aa11.15□□□□□ -0.62
APP-211ENST00000462267 OGG1O15527 345 aa11.15□□□□□ -0.62
APP-211ENST00000462267 S1PR2O95136 353 aa11.15□□□□□ -0.62
APP-211ENST00000462267 GSTT2P0CG29 244 aa11.15□□□□□ -0.62
APP-211ENST00000462267 GSTT2BP0CG30 244 aa11.15□□□□□ -0.62
APP-211ENST00000462267 LIMS3P0CW19 117 aa11.15□□□□□ -0.62
APP-211ENST00000462267 LIMS4P0CW20 117 aa11.15□□□□□ -0.62
APP-211ENST00000462267 GYS2P54840 703 aa11.15□□□□□ -0.62
APP-211ENST00000462267 MED21Q13503 144 aa11.15□□□□□ -0.62
APP-211ENST00000462267 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
APP-211ENST00000462267 AMIGO2Q86SJ2 522 aa11.15□□□□□ -0.62
APP-211ENST00000462267 ZNF645Q8N7E2 425 aa11.15□□□□□ -0.62
APP-211ENST00000462267 CD300LFQ8TDQ1 290 aa11.15□□□□□ -0.62
APP-211ENST00000462267 EEF1AKMT3Q96AZ1 226 aa11.15□□□□□ -0.62
APP-211ENST00000462267 UQCC2Q9BRT2 126 aa11.15□□□□□ -0.62
APP-211ENST00000462267 ZNF430Q9H8G1 570 aaPredicted RBP11.15□□□□□ -0.62
APP-211ENST00000462267 AASSQ9UDR5 926 aa11.15□□□□□ -0.62
APP-211ENST00000462267 P0DMU3 169 aa11.14□□□□□ -0.63
APP-211ENST00000462267 FAM231AP0DMU4 169 aa11.14□□□□□ -0.63
APP-211ENST00000462267 FAM231CP0DMU5 169 aa11.14□□□□□ -0.63
APP-211ENST00000462267 PSMB6P28072 239 aa11.14□□□□□ -0.63
APP-211ENST00000462267 TPBGQ13641 420 aa11.14□□□□□ -0.63
APP-211ENST00000462267 MMD2Q8IY49 270 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms