RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SHOXO15266 292 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 TRGV3P03979 118 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 RRASP10301 218 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 RTL8BQ17RB0 113 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 ZNF773Q6PK81 442 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 POC5Q8NA72 575 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 DDB2Q92466 427 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 ADTRPQ96IZ2 230 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 ST6GALNAC5Q9BVH7 336 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 DAPK2Q9UIK4 370 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 TENM3Q9P273 2699 aa14.61□□□□□ -0.07
VARS-220ENST00000461874 H3BUA1 57 aa14.6□□□□□ -0.07
VARS-220ENST00000461874 SAP30O75446 220 aa14.6□□□□□ -0.07
VARS-220ENST00000461874 NHLRC4P0CG21 123 aaPredicted RBP14.6□□□□□ -0.07
VARS-220ENST00000461874 DUTP33316 252 aaKnown RBP14.6□□□□□ -0.07
VARS-220ENST00000461874 SFXN4Q6P4A7 337 aa14.6□□□□□ -0.07
VARS-220ENST00000461874 OR5T1Q8NG75 326 aa14.6□□□□□ -0.07
VARS-220ENST00000461874 TMEM68Q96MH6 324 aa14.6□□□□□ -0.07
VARS-220ENST00000461874 OR51E2Q9H255 320 aa14.6□□□□□ -0.07
VARS-220ENST00000461874 DCSTAMPQ9H295 470 aa14.6□□□□□ -0.07
VARS-220ENST00000461874 ZNF355PQ9NSJ1 428 aa14.6□□□□□ -0.07
VARS-220ENST00000461874 RRP15Q9Y3B9 282 aaKnown RBP14.6□□□□□ -0.07
VARS-220ENST00000461874 LINC00473A8K010 186 aa14.59□□□□□ -0.07
VARS-220ENST00000461874 SCGNO76038 276 aa14.59□□□□□ -0.07
VARS-220ENST00000461874 LY86O95711 162 aa14.59□□□□□ -0.07
VARS-220ENST00000461874 CTXN2P0C2S0 81 aa14.59□□□□□ -0.07
VARS-220ENST00000461874 SDC2P34741 201 aa14.59□□□□□ -0.07
VARS-220ENST00000461874 PITPNAQ00169 270 aa14.59□□□□□ -0.07
VARS-220ENST00000461874 MRGPRG-AS1Q2M3A8 158 aa14.59□□□□□ -0.07
VARS-220ENST00000461874 ACSM6Q6P461 480 aa14.59□□□□□ -0.07
VARS-220ENST00000461874 NUDCD2Q8WVJ2 157 aa14.59□□□□□ -0.07
VARS-220ENST00000461874 TMEM235A6NFC5 223 aa14.58□□□□□ -0.08
VARS-220ENST00000461874 UBE2KP61086 200 aa14.58□□□□□ -0.08
VARS-220ENST00000461874 TEX45Q8NA69 505 aa14.58□□□□□ -0.08
VARS-220ENST00000461874 LGALS14Q8TCE9 139 aa14.58□□□□□ -0.08
VARS-220ENST00000461874 OR2W1Q9Y3N9 320 aa14.58□□□□□ -0.08
VARS-220ENST00000461874 A0A0G2JLM5 398 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 C13orf42A0A1B0GVH6 325 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 J3QRK9 145 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 BRI3O95415 125 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 CRYZL1O95825 349 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 HLA-DQB1P01920 261 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 CLEC2LP0C7M8 214 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 NFYAP23511 347 aaPredicted RBP14.57□□□□□ -0.08
VARS-220ENST00000461874 GNG2P59768 71 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 PRSS8Q16651 343 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 VMA21Q3ZAQ7 101 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 CNIH2Q6PI25 160 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 ZNF645Q8N7E2 425 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 OSR1Q8TAX0 266 aaPredicted RBP14.57□□□□□ -0.08
VARS-220ENST00000461874 WWC2-AS2Q96NR7 200 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 RHBDL2Q9NX52 303 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 TNCP24821 2201 aa14.57□□□□□ -0.08
VARS-220ENST00000461874 SSX5O60225 188 aa14.56□□□□□ -0.08
VARS-220ENST00000461874 SPNP16150 400 aa14.56□□□□□ -0.08
VARS-220ENST00000461874 MXD1Q05195 221 aa14.56□□□□□ -0.08
VARS-220ENST00000461874 RNF167Q9H6Y7 350 aa14.56□□□□□ -0.08
VARS-220ENST00000461874 RANGRFQ9HD47 186 aaPredicted RBP14.56□□□□□ -0.08
VARS-220ENST00000461874 LOC100506127A0A0U1RQW1 187 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 MSGN1A6NI15 193 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 SLC22A5O76082 557 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 IGLV2-14P01704 120 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 SCAND1P57086 179 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 IDO2Q6ZQW0 420 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 OR6Q1Q8NGQ2 317 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 OR5H6Q8NGV6 325 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 OR4C12Q96R67 309 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 TINAGL1Q9GZM7 467 aaPredicted RBP14.55□□□□□ -0.08
VARS-220ENST00000461874 ANXA10Q9UJ72 324 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 RBMX2Q9Y388 322 aaKnown RBP14.55□□□□□ -0.08
VARS-220ENST00000461874 SMAD5-AS1Q9Y6J3 95 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 U3KQK5 164 aa14.55□□□□□ -0.08
VARS-220ENST00000461874 IGKV1D-13A0A0B4J2D9 117 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 IGKV1-13P0DP09 117 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 CD36P16671 472 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 ZP3P21754 424 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 NEDD8Q15843 81 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 SLC25A38Q96DW6 304 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 PHB2Q99623 299 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 ASCL2Q99929 193 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 ELOVL1Q9BW60 279 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 ETV7Q9Y603 341 aa14.54□□□□□ -0.08
VARS-220ENST00000461874 NBEAL2Q6ZNJ1 2754 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 STAB2Q8WWQ8 2551 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 ANKRD34BA5PLL1 514 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 FCGR3BO75015 233 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 TUSC2O75896 110 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 APELAP0DMC3 54 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 GP9P14770 177 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 AADACP22760 399 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 RPL30P62888 115 aaKnown RBP14.53□□□□□ -0.08
VARS-220ENST00000461874 TNXAQ16473 311 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 KCTD21Q4G0X4 260 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 IDNKQ5T6J7 187 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 KCTD9Q7L273 389 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 OVCH2Q7RTZ1 564 aa14.53□□□□□ -0.08
VARS-220ENST00000461874 ADAD2Q8NCV1 583 aaKnown RBP14.53□□□□□ -0.08
VARS-220ENST00000461874 SRSF12Q8WXF0 261 aaKnown RBP14.53□□□□□ -0.08
VARS-220ENST00000461874 ZNF430Q9H8G1 570 aaPredicted RBP14.53□□□□□ -0.08
VARS-220ENST00000461874 COA4Q9NYJ1 87 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms