RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 OR51B6Q9H340 312 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 HRASLSQ9HDD0 168 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 PARVAQ9NVD7 372 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 PLEKHJ1Q9NW61 149 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 CMTM6Q9NX76 183 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 COMMD9Q9P000 198 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 TMEM216Q9P0N5 145 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 VPREB3Q9UKI3 123 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 SNX12Q9UMY4 172 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 TP53TG1Q9Y2A0 90 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 C15orf41Q9Y2V0 281 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 KLK5Q9Y337 293 aaPredicted RBP0.22□□□□□ -2.37
PTPN22-203ENST00000460620 POLR3HQ9Y535 204 aaPredicted RBP0.22□□□□□ -2.37
PTPN22-203ENST00000460620 RBM7Q9Y580 266 aaKnown RBP0.22□□□□□ -2.37
PTPN22-203ENST00000460620 SNX10Q9Y5X0 201 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 REREQ9P2R6 1566 aa0.22□□□□□ -2.37
PTPN22-203ENST00000460620 NUP210LQ5VU65 1888 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 PTPRJQ12913 1337 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 USP42Q9H9J4 1324 aaKnown RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 A0A1W2PP64 1363 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 PIK3R4Q99570 1358 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 ROS1P08922 2347 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 RGS12O14924 1447 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 NPATQ14207 1427 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 RIMS2Q9UQ26 1411 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 STRCQ7RTU9 1775 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 SNRNP200O75643 2136 aaKnown RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 ALPK2Q86TB3 2170 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 PLXNA4Q9HCM2 1894 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 ZFC3H1O60293 1989 aaKnown RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 TMSB15BA0A087X1C1 80 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 MUC21A0A0G2JKD1 596 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 MUC21A0A140T8X8 626 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 A0A1W2PQL4 384 aaPredicted RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 A8MUN3 132 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 F8VZ95 297 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 INMT-MINDY4F8WBC2 141 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 H0Y980 276 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 TRAPPC2LH3BP13 241 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 H3BRN7 92 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 H3BT86 120 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 J3QQQ9 107 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 M0QZ92 97 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 CCRL2O00421 344 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 COX7A2LO14548 114 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 ITGB1BP1O14713 200 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 PHYHO14832 338 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 UBE2L6O14933 153 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 GNRH2O43555 120 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 HPGDSO60760 199 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 UGT2B11O75310 529 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 PGLYRP1O75594 196 aaPredicted RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 STK16O75716 305 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 PSMG1O95456 288 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 NSA2O95478 260 aaKnown RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 IGLV3-27P01718 113 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 IGHV1-69P01742 117 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 PPBPP02775 128 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 HLA-DQB2P05538 268 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 TPM3P06753 285 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 IGHV3-30-3P0DP02 117 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 LYNX1P0DP58 116 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 NQO1P15559 274 aaKnown RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 RPL12P30050 165 aaKnown RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 CA7P43166 264 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 LPAR6P43657 344 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 HINT1P49773 126 aaPredicted RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 AQP4P55087 323 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 TCL1AP56279 114 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 H2BFSP57053 126 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 TMEM33P57088 247 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 CXCR4P61073 352 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 RPL26P61254 145 aaKnown RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 TPM4P67936 248 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 HLA-DRB3P79483 266 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 SLC38A11Q08AI6 406 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 ITGB3BPQ13352 177 aaPredicted RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 COTL1Q14019 142 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 PAFAH1B3Q15102 231 aaKnown RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 KISS1Q15726 138 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 USF2Q15853 346 aaPredicted RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 LRRC26Q2I0M4 334 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 ZNF791Q3KP31 576 aaPredicted RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 TMEM176BQ3YBM2 270 aaPredicted RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 TMEM155Q4W5P6 130 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 C1orf194Q5T5A4 169 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 C1orf195Q5TG92 126 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 OR10K2Q6IF99 312 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 C8orf74Q6P047 294 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 DNM1P34Q6PK57 102 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 AGTRAPQ6RW13 159 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 AMTNQ6UX39 209 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 SCGB1D4Q6XE38 83 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 Q6ZRN7 208 aaPredicted RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 ZNF767PQ75MW2 155 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 GLT6D1Q7Z4J2 308 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 SPATA24Q86W54 205 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 SLC13A5Q86YT5 568 aaPredicted RBP0.21□□□□□ -2.38
PTPN22-203ENST00000460620 GPHB5Q86YW7 130 aa0.21□□□□□ -2.38
PTPN22-203ENST00000460620 UMODL1-AS1Q8N2C9 162 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms