RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LGALS7P47929 136 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 F2RL1P55085 397 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 RPS16P62249 146 aaKnown RBP17.86■□□□□ 0.45
C9orf3-209ENST00000460573 CATR1Q13166 79 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 ABCA11PQ4W5N1 156 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 SLC38A6Q8IZM9 456 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 Q8N9W7 124 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 OR4C16Q8NGL9 310 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 TCTEX1D2Q8WW35 142 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 TAF15Q92804 592 aaKnown RBP eCLIP17.86■□□□□ 0.451e-6■■■■□ 22
C9orf3-209ENST00000460573 TSNAXQ99598 290 aaKnown RBP17.86■□□□□ 0.45
C9orf3-209ENST00000460573 RASL11BQ9BPW5 248 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 PALMDQ9NP74 551 aa17.86■□□□□ 0.45
C9orf3-209ENST00000460573 NDUFA3O95167 84 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 IGKV1-16P04430 117 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 ZNF735P0CB33 412 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 CD40LGP29965 261 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 KIR2DS2P43631 304 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 DCTN2Q13561 401 aaKnown RBP17.85■□□□□ 0.45
C9orf3-209ENST00000460573 TMEM177Q53S58 311 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 FAM71E2Q8N5Q1 922 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 RITA1Q96K30 269 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 PRRT1Q99946 306 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 RSRP1Q9BUV0 290 aa17.85■□□□□ 0.45
C9orf3-209ENST00000460573 SPDEFO95238 335 aa17.84■□□□□ 0.45
C9orf3-209ENST00000460573 MDKP21741 143 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-209ENST00000460573 RPL30P62888 115 aaKnown RBP17.84■□□□□ 0.45
C9orf3-209ENST00000460573 KLF9Q13886 244 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-209ENST00000460573 SCGB2B2Q4G0G5 96 aa17.84■□□□□ 0.45
C9orf3-209ENST00000460573 ARSJQ5FYB0 599 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-209ENST00000460573 OSR1Q8TAX0 266 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-209ENST00000460573 ZNF486Q96H40 463 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-209ENST00000460573 SCP2D1Q9UJQ7 156 aa17.84■□□□□ 0.45
C9orf3-209ENST00000460573 RNF114Q9Y508 228 aa17.84■□□□□ 0.45
C9orf3-209ENST00000460573 TENM1Q9UKZ4 2725 aa17.84■□□□□ 0.45
C9orf3-209ENST00000460573 TNFSF12O43508 249 aa17.83■□□□□ 0.44
C9orf3-209ENST00000460573 FCGR3BO75015 233 aa17.83■□□□□ 0.44
C9orf3-209ENST00000460573 INPP1P49441 399 aa17.83■□□□□ 0.44
C9orf3-209ENST00000460573 PPP5CP53041 499 aa17.83■□□□□ 0.44
C9orf3-209ENST00000460573 TRIQKQ629K1 86 aa17.83■□□□□ 0.44
C9orf3-209ENST00000460573 OR4S2Q8NH73 311 aa17.83■□□□□ 0.44
C9orf3-209ENST00000460573 ZFAND1Q8TCF1 268 aa17.83■□□□□ 0.44
C9orf3-209ENST00000460573 SLC2A8Q9NY64 477 aa17.83■□□□□ 0.44
C9orf3-209ENST00000460573 RRHO14718 337 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 SHOXO15266 292 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 RBFOX2O43251 390 aaKnown RBP eCLIP17.82■□□□□ 0.442e-8■■■■□ 22.3
C9orf3-209ENST00000460573 PGLYRP1O75594 196 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-209ENST00000460573 PGAM2P15259 253 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 CNTFRP26992 372 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 SURF2Q15527 256 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-209ENST00000460573 C5orf64Q2M2E5 130 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 C9orf152Q5JTZ5 239 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 FAAP20Q6NZ36 180 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 TCTEX1D1Q8N7M0 179 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 POC5Q8NA72 575 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 CD300LFQ8TDQ1 290 aa17.82■□□□□ 0.44
C9orf3-209ENST00000460573 RBMXL1Q96E39 390 aaKnown RBP17.82■□□□□ 0.44
C9orf3-209ENST00000460573 CRYZL1O95825 349 aa17.81■□□□□ 0.44
C9orf3-209ENST00000460573 VDAC2P45880 294 aaPredicted RBP17.81■□□□□ 0.44
C9orf3-209ENST00000460573 PSG5Q15238 335 aa17.81■□□□□ 0.44
C9orf3-209ENST00000460573 BAK1Q16611 211 aa17.81■□□□□ 0.44
C9orf3-209ENST00000460573 ZNF57Q68EA5 555 aaPredicted RBP17.81■□□□□ 0.44
C9orf3-209ENST00000460573 Q6ZS46 218 aa17.81■□□□□ 0.44
C9orf3-209ENST00000460573 OR51S1Q8NGJ8 323 aa17.81■□□□□ 0.44
C9orf3-209ENST00000460573 HARBI1Q96MB7 349 aa17.81■□□□□ 0.44
C9orf3-209ENST00000460573 SDHCQ99643 169 aaPredicted RBP17.81■□□□□ 0.44
C9orf3-209ENST00000460573 HRASLSQ9HDD0 168 aa17.81■□□□□ 0.44
C9orf3-209ENST00000460573 MCUBQ9NWR8 336 aa17.81■□□□□ 0.44
C9orf3-209ENST00000460573 KCNAB3O43448 404 aa17.8■□□□□ 0.44
C9orf3-209ENST00000460573 IGHG2P01859 326 aa17.8■□□□□ 0.44
C9orf3-209ENST00000460573 PROK1P58294 105 aa17.8■□□□□ 0.44
C9orf3-209ENST00000460573 RND3P61587 244 aa17.8■□□□□ 0.44
C9orf3-209ENST00000460573 PLGLAQ15195 96 aa17.8■□□□□ 0.44
C9orf3-209ENST00000460573 LIN54Q6MZP7 749 aa17.8■□□□□ 0.44
C9orf3-209ENST00000460573 SCGB3A2Q96PL1 93 aa17.8■□□□□ 0.44
C9orf3-209ENST00000460573 AIFM2Q9BRQ8 373 aa17.8■□□□□ 0.44
C9orf3-209ENST00000460573 SERTAD4Q9NUC0 356 aa17.8■□□□□ 0.44
C9orf3-209ENST00000460573 PEX14O75381 377 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 HLA-DRB1P01911 266 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 RLN1P04808 185 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 BRWD1-AS2P59051 145 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 VMA21Q3ZAQ7 101 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 PHLDA2Q53GA4 152 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 IDO2Q6ZQW0 420 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 SLC35E3Q7Z769 313 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 SPAG16Q8N0X2 631 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 OR51H1Q8NH63 302 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 GPHA2Q96T91 129 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 CCDC32Q9BV29 185 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 FBXL15Q9H469 300 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 SLC2A9Q9NRM0 540 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 FAM212BQ9NTI7 297 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-209ENST00000460573 METTL1Q9UBP6 276 aaKnown RBP17.79■□□□□ 0.44
C9orf3-209ENST00000460573 SIGLEC9Q9Y336 463 aa17.79■□□□□ 0.44
C9orf3-209ENST00000460573 NAP1L6A6NFF2 107 aa17.78■□□□□ 0.44
C9orf3-209ENST00000460573 SH2D7A6NKC9 451 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-209ENST00000460573 HPRT1P00492 218 aa17.78■□□□□ 0.44
C9orf3-209ENST00000460573 IGLV2-23P01705 113 aa17.78■□□□□ 0.44
C9orf3-209ENST00000460573 CTSDP07339 412 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-209ENST00000460573 IL7P13232 177 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms