RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CEACAM18A8MTB9 384 aa12.57□□□□□ -0.4
PTPRU-205ENST00000460170 EIF3GO75821 320 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPRU-205ENST00000460170 SRP14P37108 136 aaKnown RBP12.57□□□□□ -0.4
PTPRU-205ENST00000460170 RPL27AP46776 148 aaKnown RBP12.57□□□□□ -0.4
PTPRU-205ENST00000460170 RPL8P62917 257 aaKnown RBP12.57□□□□□ -0.4
PTPRU-205ENST00000460170 C21orf62-AS1Q17RA5 79 aa12.57□□□□□ -0.4
PTPRU-205ENST00000460170 RPRMQ9NS64 109 aa12.57□□□□□ -0.4
PTPRU-205ENST00000460170 IDI2-AS1Q9NZ38 188 aa12.57□□□□□ -0.4
PTPRU-205ENST00000460170 GBF1Q92538 1859 aa12.57□□□□□ -0.4
PTPRU-205ENST00000460170 NEURL1O76050 574 aa12.57□□□□□ -0.4
PTPRU-205ENST00000460170 LGALS7P47929 136 aa12.57□□□□□ -0.4
PTPRU-205ENST00000460170 HIST1H2BAQ96A08 127 aa12.57□□□□□ -0.4
PTPRU-205ENST00000460170 M0R2Z0 102 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 WNT9BO14905 357 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 SMPD2O60906 423 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 CLPSP04118 112 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 EIF4E3Q8N5X7 224 aaKnown RBP12.56□□□□□ -0.4
PTPRU-205ENST00000460170 ZDHHC16Q969W1 377 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 TCF19Q9Y242 345 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 KCNMB2Q9Y691 235 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 PTPRDP23468 1912 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 SELENOTP62341 195 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 HIST3H3Q16695 136 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 PQLC2Q6ZP29 291 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 DOLPP1Q86YN1 238 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 TRAV34A0A0B4J273 112 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 C12orf77C9JDV5 145 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 CDK2AP1O14519 115 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 KLF7O75840 302 aaPredicted RBP12.56□□□□□ -0.4
PTPRU-205ENST00000460170 COTL1Q14019 142 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 ZNF596Q8TC21 504 aa12.56□□□□□ -0.4
PTPRU-205ENST00000460170 HYPMO75409 117 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 LINC00869P0C866 280 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 SMIM17P0DL12 118 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 OR8I2Q8N0Y5 310 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 PCGF1Q9BSM1 259 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 IGHV3-21A0A0B4J1V1 117 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 PQLC2LA1A4F0 135 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 IFNL4K9M1U5 179 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 CCL21O00585 134 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 CSN3P07498 182 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 NHLH1Q02575 133 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 ZFP36L1Q07352 338 aaKnown RBP12.55□□□□□ -0.4
PTPRU-205ENST00000460170 ELOBQ15370 118 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 LEAP2Q969E1 77 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 TMUB1Q9BVT8 246 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
PTPRU-205ENST00000460170 HIST1H1BP16401 226 aaKnown RBP12.55□□□□□ -0.4
PTPRU-205ENST00000460170 WBP1Q96G27 269 aa12.55□□□□□ -0.4
PTPRU-205ENST00000460170 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 M0R143 59 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 OR5AL1P0C617 328 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 C19orf35Q6ZS72 473 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 FAM222BQ8WU58 562 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 GRAMD2BQ96HH9 432 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 WASHC3Q9Y3C0 194 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 A0A0A6YYD4 124 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 ZNF716A6NP11 495 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 ZNF506Q5JVG8 444 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 GTF2H5Q6ZYL4 71 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 ABHD12Q8N2K0 398 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 IGHV3-72A0A0B4J1Y9 119 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 H0YIZ8 118 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 PKIAP61925 76 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 MYLKQ15746 1914 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 OR2J3O76001 311 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 LHX2P50458 406 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 ATRAIDQ6UW56 229 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 C11orf42Q8N5U0 333 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 OR2D3Q8NGH3 330 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 RCC1LQ96I51 464 aaKnown RBP12.54□□□□□ -0.4
PTPRU-205ENST00000460170 SFXN3Q9BWM7 321 aa12.54□□□□□ -0.4
PTPRU-205ENST00000460170 ISLRO14498 428 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 APCSP02743 223 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 CECR9P0C854 216 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 PTTG1IPP53801 180 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 CLDN18P56856 261 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 RIGQ13278 110 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 ACP7Q6ZNF0 438 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 C5orf17Q8NAS9 161 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 F2RL2O00254 374 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 DLL1O00548 723 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 ERVFRD-1P60508 538 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 VWA1Q6PCB0 445 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 BIVMQ86UB2 503 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 WDFY1Q8IWB7 410 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 MMD2Q8IY49 270 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 HIGD1AQ9Y241 93 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 NLRC5Q86WI3 1866 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 TEX50A0A1B0GTY4 177 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 ZNF729A6NN14 1252 aaPredicted RBP12.53□□□□□ -0.4
PTPRU-205ENST00000460170 BMI1P35226 326 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 PSG7Q13046 419 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 CCDC144NLQ6NUI1 221 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 ZNRF1Q8ND25 227 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 DEPPQ9NTK1 212 aa12.53□□□□□ -0.4
PTPRU-205ENST00000460170 TP53BP1Q12888 1972 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms